Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC1P29353 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC1P29353 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC1P29353 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC1P29353 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC1P29353 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC1P29353 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC1P29353 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC1P29353 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SHC1P29353 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SHC1P29353 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SHC1P29353 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SHC1P29353 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.16■□□□□ 0.5
SHC1P29353 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.16■□□□□ 0.5
SHC1P29353 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.16■□□□□ 0.5
SHC1P29353 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.16■□□□□ 0.5
SHC1P29353 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.16■□□□□ 0.5
SHC1P29353 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.16■□□□□ 0.5
SHC1P29353 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.16■□□□□ 0.5
SHC1P29353 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.16■□□□□ 0.5
SHC1P29353 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.16■□□□□ 0.5
SHC1P29353 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SHC1P29353 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.16■□□□□ 0.5
SHC1P29353 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SHC1P29353 PTBP1P-201ENST00000554374 1601 ntBASIC18.16■□□□□ 0.5
SHC1P29353 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC1P29353 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SHC1P29353 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SHC1P29353 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC1P29353 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SHC1P29353 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SHC1P29353 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
SHC1P29353 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.15■□□□□ 0.5
SHC1P29353 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.15■□□□□ 0.5
SHC1P29353 KRT18P6-201ENST00000555540 1265 ntBASIC18.15■□□□□ 0.5
SHC1P29353 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SHC1P29353 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.15■□□□□ 0.5
SHC1P29353 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.15■□□□□ 0.5
SHC1P29353 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SHC1P29353 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC1P29353 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC1P29353 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SHC1P29353 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC1P29353 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
SHC1P29353 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.14■□□□□ 0.5
SHC1P29353 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SHC1P29353 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SHC1P29353 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SHC1P29353 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.14■□□□□ 0.49
SHC1P29353 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SHC1P29353 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.14■□□□□ 0.49
SHC1P29353 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.14■□□□□ 0.49
SHC1P29353 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHC1P29353 AL020996.1-203ENST00000536896 2307 ntBASIC18.14■□□□□ 0.49
SHC1P29353 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC1P29353 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SHC1P29353 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC1P29353 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC1P29353 RNA5SP413-201ENST00000516373 109 ntBASIC18.13■□□□□ 0.49
SHC1P29353 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms