Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.72■□□□□ 0.75
GABRB3P28472 BX276092.2-201ENST00000417668 665 ntBASIC19.72■□□□□ 0.75
GABRB3P28472 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.72■□□□□ 0.75
GABRB3P28472 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.72■□□□□ 0.75
GABRB3P28472 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.72■□□□□ 0.75
GABRB3P28472 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
GABRB3P28472 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.72■□□□□ 0.75
GABRB3P28472 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 PHGDH-210ENST00000641115 1638 ntBASIC19.72■□□□□ 0.75
GABRB3P28472 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GABRB3P28472 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GABRB3P28472 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.72■□□□□ 0.75
GABRB3P28472 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GABRB3P28472 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.71■□□□□ 0.75
GABRB3P28472 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
GABRB3P28472 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GABRB3P28472 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.71■□□□□ 0.75
GABRB3P28472 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.71■□□□□ 0.75
GABRB3P28472 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.71■□□□□ 0.75
GABRB3P28472 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.71■□□□□ 0.75
GABRB3P28472 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
GABRB3P28472 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GABRB3P28472 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GABRB3P28472 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRB3P28472 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GABRB3P28472 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.71■□□□□ 0.75
GABRB3P28472 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABRB3P28472 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GABRB3P28472 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABRB3P28472 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABRB3P28472 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABRB3P28472 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GABRB3P28472 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GABRB3P28472 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.7■□□□□ 0.74
GABRB3P28472 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
GABRB3P28472 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABRB3P28472 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABRB3P28472 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABRB3P28472 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.7■□□□□ 0.74
GABRB3P28472 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GABRB3P28472 AC087289.5-201ENST00000586076 3175 ntBASIC19.69■□□□□ 0.74
GABRB3P28472 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.69■□□□□ 0.74
GABRB3P28472 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GABRB3P28472 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GABRB3P28472 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.69■□□□□ 0.74
GABRB3P28472 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.69■□□□□ 0.74
GABRB3P28472 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.69■□□□□ 0.74
GABRB3P28472 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
GABRB3P28472 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.69■□□□□ 0.74
GABRB3P28472 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.69■□□□□ 0.74
GABRB3P28472 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRB3P28472 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GABRB3P28472 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
GABRB3P28472 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABRB3P28472 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.68■□□□□ 0.74
GABRB3P28472 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.68■□□□□ 0.74
GABRB3P28472 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRB3P28472 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
GABRB3P28472 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
GABRB3P28472 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.68■□□□□ 0.74
GABRB3P28472 MIPEPP3-201ENST00000412105 444 ntBASIC19.68■□□□□ 0.74
GABRB3P28472 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.68■□□□□ 0.74
GABRB3P28472 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.68■□□□□ 0.74
GABRB3P28472 AC083906.2-201ENST00000511578 360 ntBASIC19.68■□□□□ 0.74
GABRB3P28472 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.68■□□□□ 0.74
GABRB3P28472 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.68■□□□□ 0.74
GABRB3P28472 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRB3P28472 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRB3P28472 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABRB3P28472 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
GABRB3P28472 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRB3P28472 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABRB3P28472 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABRB3P28472 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
GABRB3P28472 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms