Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDH3P22223 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDH3P22223 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH3P22223 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDH3P22223 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.39■□□□□ 0.69
CDH3P22223 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDH3P22223 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH3P22223 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDH3P22223 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CDH3P22223 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDH3P22223 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CDH3P22223 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.39■□□□□ 0.69
CDH3P22223 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH3P22223 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDH3P22223 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDH3P22223 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH3P22223 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH3P22223 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CDH3P22223 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH3P22223 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.38■□□□□ 0.69
CDH3P22223 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH3P22223 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH3P22223 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CDH3P22223 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.38■□□□□ 0.69
CDH3P22223 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDH3P22223 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDH3P22223 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH3P22223 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH3P22223 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH3P22223 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH3P22223 AC007225.1-201ENST00000566331 1836 ntBASIC19.37■□□□□ 0.69
CDH3P22223 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH3P22223 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CDH3P22223 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH3P22223 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH3P22223 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH3P22223 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH3P22223 POM121L13P-201ENST00000422362 380 ntBASIC19.37■□□□□ 0.69
CDH3P22223 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH3P22223 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH3P22223 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CDH3P22223 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH3P22223 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH3P22223 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH3P22223 LINC01006-201ENST00000333319 2292 ntBASIC19.36■□□□□ 0.69
CDH3P22223 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDH3P22223 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDH3P22223 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH3P22223 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.36■□□□□ 0.69
CDH3P22223 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH3P22223 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH3P22223 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDH3P22223 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH3P22223 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH3P22223 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH3P22223 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH3P22223 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH3P22223 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDH3P22223 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH3P22223 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH3P22223 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 AL158047.1-201ENST00000445918 881 ntBASIC19.35■□□□□ 0.69
CDH3P22223 AC098590.1-201ENST00000468126 897 ntBASIC19.35■□□□□ 0.69
CDH3P22223 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH3P22223 AC023632.3-201ENST00000521633 145 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms