Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.65■□□□□ 0.58
CCNA2P20248 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA2P20248 AC243732.1-201ENST00000612648 864 ntBASIC18.65■□□□□ 0.58
CCNA2P20248 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA2P20248 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA2P20248 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CCNA2P20248 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCNA2P20248 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA2P20248 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA2P20248 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCNA2P20248 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CCNA2P20248 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA2P20248 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.64■□□□□ 0.58
CCNA2P20248 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCNA2P20248 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCNA2P20248 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNA2P20248 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.64■□□□□ 0.57
CCNA2P20248 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNA2P20248 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CCNA2P20248 BID-214ENST00000617586 542 ntTSL 5 BASIC18.64■□□□□ 0.57
CCNA2P20248 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCNA2P20248 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CCNA2P20248 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCNA2P20248 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA2P20248 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCNA2P20248 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCNA2P20248 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNA2P20248 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNA2P20248 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNA2P20248 AC007322.3-201ENST00000426526 701 ntBASIC18.63■□□□□ 0.57
CCNA2P20248 AC006015.1-201ENST00000429970 570 ntBASIC18.63■□□□□ 0.57
CCNA2P20248 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.63■□□□□ 0.57
CCNA2P20248 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.63■□□□□ 0.57
CCNA2P20248 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.63■□□□□ 0.57
CCNA2P20248 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCNA2P20248 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA2P20248 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNA2P20248 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNA2P20248 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCNA2P20248 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNA2P20248 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNA2P20248 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.62■□□□□ 0.57
CCNA2P20248 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 AC125437.2-201ENST00000625180 2167 ntBASIC18.62■□□□□ 0.57
CCNA2P20248 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNA2P20248 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
CCNA2P20248 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCNA2P20248 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.62■□□□□ 0.57
CCNA2P20248 AC004911.1-201ENST00000416316 871 ntBASIC18.62■□□□□ 0.57
CCNA2P20248 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.62■□□□□ 0.57
CCNA2P20248 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
CCNA2P20248 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCNA2P20248 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.62■□□□□ 0.57
CCNA2P20248 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA2P20248 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNA2P20248 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.62■□□□□ 0.57
CCNA2P20248 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCNA2P20248 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
CCNA2P20248 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.62■□□□□ 0.57
CCNA2P20248 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.62■□□□□ 0.57
CCNA2P20248 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCNA2P20248 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCNA2P20248 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.61■□□□□ 0.57
CCNA2P20248 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCNA2P20248 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNA2P20248 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCNA2P20248 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNA2P20248 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCNA2P20248 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCNA2P20248 CDV3P1-201ENST00000471403 739 ntBASIC18.61■□□□□ 0.57
CCNA2P20248 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.61■□□□□ 0.57
CCNA2P20248 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms