Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 KRT8P36-201ENST00000489121 1440 ntBASIC19.76■□□□□ 0.75
XRCC1P18887 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.76■□□□□ 0.75
XRCC1P18887 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.76■□□□□ 0.75
XRCC1P18887 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.76■□□□□ 0.75
XRCC1P18887 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.76■□□□□ 0.75
XRCC1P18887 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.76■□□□□ 0.75
XRCC1P18887 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.76■□□□□ 0.75
XRCC1P18887 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
XRCC1P18887 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.76■□□□□ 0.75
XRCC1P18887 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.76■□□□□ 0.75
XRCC1P18887 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC1P18887 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.76■□□□□ 0.75
XRCC1P18887 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
XRCC1P18887 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.75■□□□□ 0.75
XRCC1P18887 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
XRCC1P18887 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
XRCC1P18887 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
XRCC1P18887 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
XRCC1P18887 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
XRCC1P18887 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 UNC93B4-201ENST00000505679 747 ntBASIC19.75■□□□□ 0.75
XRCC1P18887 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.75■□□□□ 0.75
XRCC1P18887 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
XRCC1P18887 AC008403.3-201ENST00000598924 454 ntBASIC19.75■□□□□ 0.75
XRCC1P18887 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.75■□□□□ 0.75
XRCC1P18887 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.75■□□□□ 0.75
XRCC1P18887 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 FP700111.2-201ENST00000619190 1892 ntBASIC19.75■□□□□ 0.75
XRCC1P18887 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC1P18887 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.75■□□□□ 0.75
XRCC1P18887 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
XRCC1P18887 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.74■□□□□ 0.75
XRCC1P18887 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
XRCC1P18887 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.74■□□□□ 0.75
XRCC1P18887 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.74■□□□□ 0.75
XRCC1P18887 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.74■□□□□ 0.75
XRCC1P18887 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.74■□□□□ 0.75
XRCC1P18887 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.74■□□□□ 0.75
XRCC1P18887 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.74■□□□□ 0.75
XRCC1P18887 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.74■□□□□ 0.75
XRCC1P18887 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.74■□□□□ 0.75
XRCC1P18887 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
XRCC1P18887 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
XRCC1P18887 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.74■□□□□ 0.75
XRCC1P18887 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC1P18887 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.74■□□□□ 0.75
XRCC1P18887 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
XRCC1P18887 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC1P18887 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC1P18887 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
XRCC1P18887 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC1P18887 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 AC006058.3-201ENST00000606217 1069 ntBASIC19.73■□□□□ 0.75
XRCC1P18887 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC1P18887 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
XRCC1P18887 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms