Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CSB-PGBD3P0DP91 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CSB-PGBD3P0DP91 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 INGX-201ENST00000359239 846 ntBASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 AK4P3-201ENST00000418260 669 ntBASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 AC131212.4-201ENST00000623606 975 ntBASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CSB-PGBD3P0DP91 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 FDX2-206ENST00000492239 773 ntTSL 2 BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 SLC25A1P4-201ENST00000567977 778 ntBASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CSB-PGBD3P0DP91 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.36■■□□□ 1.81
CSB-PGBD3P0DP91 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 GUK1-204ENST00000366721 689 ntTSL 3 BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 TUBB8P6-201ENST00000436895 1288 ntBASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 BX664615.1-201ENST00000443558 458 ntBASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 YBX1P10-201ENST00000444752 975 ntBASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 LTBR-211ENST00000543190 785 ntTSL 3 BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 AC116351.2-201ENST00000606540 1585 ntBASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 FAM87A-204ENST00000613235 858 ntBASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.35■■□□□ 1.81
CSB-PGBD3P0DP91 DPP3P2-201ENST00000416030 1696 ntBASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 USF2-205ENST00000594064 1179 ntTSL 2 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 PLK5-205ENST00000642079 1969 ntBASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 AC005229.4-201ENST00000610085 2198 ntBASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CSB-PGBD3P0DP91 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 TFP1-202ENST00000475455 1573 ntBASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 AC022616.7-201ENST00000525383 220 ntBASIC26.33■■□□□ 1.81
CSB-PGBD3P0DP91 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms