Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL5A2P05997 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC26.31■■□□□ 1.8
COL5A2P05997 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL5A2P05997 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL5A2P05997 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC26.3■■□□□ 1.8
COL5A2P05997 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC26.3■■□□□ 1.8
COL5A2P05997 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL5A2P05997 DUSP5P1-201ENST00000441325 1139 ntBASIC26.3■■□□□ 1.8
COL5A2P05997 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
COL5A2P05997 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
COL5A2P05997 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL5A2P05997 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL5A2P05997 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
COL5A2P05997 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.3■■□□□ 1.8
COL5A2P05997 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL5A2P05997 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.3■■□□□ 1.8
COL5A2P05997 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC26.3■■□□□ 1.8
COL5A2P05997 DBP-204ENST00000599385 709 ntTSL 3 BASIC26.3■■□□□ 1.8
COL5A2P05997 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC26.3■■□□□ 1.8
COL5A2P05997 AC018553.1-201ENST00000616682 1458 ntBASIC26.29■■□□□ 1.8
COL5A2P05997 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
COL5A2P05997 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
COL5A2P05997 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.29■■□□□ 1.8
COL5A2P05997 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 AC005229.4-201ENST00000610085 2198 ntBASIC26.29■■□□□ 1.8
COL5A2P05997 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
COL5A2P05997 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
COL5A2P05997 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
COL5A2P05997 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL5A2P05997 KRT126P-201ENST00000549467 1181 ntBASIC26.29■■□□□ 1.8
COL5A2P05997 CYGB-204ENST00000589342 815 ntTSL 3 BASIC26.29■■□□□ 1.8
COL5A2P05997 AC130371.2-201ENST00000619443 611 ntBASIC26.29■■□□□ 1.8
COL5A2P05997 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC26.29■■□□□ 1.8
COL5A2P05997 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC26.28■■□□□ 1.8
COL5A2P05997 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL5A2P05997 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL5A2P05997 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
COL5A2P05997 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL5A2P05997 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL5A2P05997 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL5A2P05997 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
COL5A2P05997 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL5A2P05997 CD70-202ENST00000423145 881 ntTSL 2 BASIC26.28■■□□□ 1.8
COL5A2P05997 AC007663.1-201ENST00000438948 1240 ntBASIC26.28■■□□□ 1.8
COL5A2P05997 FAM207BP-201ENST00000447172 505 ntBASIC26.28■■□□□ 1.8
COL5A2P05997 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL5A2P05997 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC26.28■■□□□ 1.8
COL5A2P05997 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC26.28■■□□□ 1.8
COL5A2P05997 AC116562.4-202ENST00000641738 218 ntBASIC26.28■■□□□ 1.8
COL5A2P05997 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.28■■□□□ 1.8
COL5A2P05997 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
COL5A2P05997 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL5A2P05997 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL5A2P05997 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC26.27■■□□□ 1.8
COL5A2P05997 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL5A2P05997 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 AC010653.2-201ENST00000623505 997 ntBASIC26.27■■□□□ 1.8
COL5A2P05997 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL5A2P05997 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC26.27■■□□□ 1.8
COL5A2P05997 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
COL5A2P05997 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC26.26■■□□□ 1.8
COL5A2P05997 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL5A2P05997 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL5A2P05997 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL5A2P05997 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL5A2P05997 AC004951.3-201ENST00000418645 1148 ntBASIC26.26■■□□□ 1.79
COL5A2P05997 TSPY5P-201ENST00000426936 936 ntBASIC26.26■■□□□ 1.79
COL5A2P05997 SLC25A1P2-201ENST00000430693 912 ntBASIC26.26■■□□□ 1.79
COL5A2P05997 CCR12P-201ENST00000446203 998 ntBASIC26.26■■□□□ 1.79
COL5A2P05997 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
COL5A2P05997 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.26■■□□□ 1.79
COL5A2P05997 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC26.26■■□□□ 1.79
COL5A2P05997 AL121956.5-201ENST00000625261 221 ntBASIC26.26■■□□□ 1.79
COL5A2P05997 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
COL5A2P05997 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL5A2P05997 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
COL5A2P05997 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL5A2P05997 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL5A2P05997 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL5A2P05997 BET1L-202ENST00000332865 533 ntTSL 5 BASIC26.25■■□□□ 1.79
COL5A2P05997 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC26.25■■□□□ 1.79
COL5A2P05997 KRT18P48-201ENST00000434763 852 ntBASIC26.25■■□□□ 1.79
COL5A2P05997 COX11P1-201ENST00000489116 835 ntBASIC26.25■■□□□ 1.79
COL5A2P05997 FAM86EP-206ENST00000510506 987 ntBASIC26.25■■□□□ 1.79
COL5A2P05997 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms