Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6AP02538 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6AP02538 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6AP02538 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6AP02538 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT6AP02538 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KRT6AP02538 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT6AP02538 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KRT6AP02538 AL158211.5-201ENST00000623583 2518 ntBASIC19.2■□□□□ 0.66
KRT6AP02538 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
KRT6AP02538 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT6AP02538 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT6AP02538 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
KRT6AP02538 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT6AP02538 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6AP02538 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT6AP02538 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT6AP02538 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
KRT6AP02538 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KRT6AP02538 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT6AP02538 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6AP02538 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT6AP02538 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6AP02538 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6AP02538 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6AP02538 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6AP02538 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KRT6AP02538 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KRT6AP02538 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
KRT6AP02538 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6AP02538 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6AP02538 AC004911.1-201ENST00000416316 871 ntBASIC19.18■□□□□ 0.66
KRT6AP02538 AC093787.1-201ENST00000450396 207 ntBASIC19.18■□□□□ 0.66
KRT6AP02538 AC023632.3-201ENST00000521633 145 ntBASIC19.18■□□□□ 0.66
KRT6AP02538 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6AP02538 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT6AP02538 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6AP02538 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KRT6AP02538 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6AP02538 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT6AP02538 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6AP02538 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT6AP02538 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
KRT6AP02538 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.17■□□□□ 0.66
KRT6AP02538 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6AP02538 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT6AP02538 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
KRT6AP02538 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 AC133552.2-202ENST00000575694 574 ntBASIC19.17■□□□□ 0.66
KRT6AP02538 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KRT6AP02538 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT6AP02538 AC080038.1-201ENST00000611274 1154 ntBASIC19.17■□□□□ 0.66
KRT6AP02538 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6AP02538 AP001271.2-201ENST00000624018 1556 ntBASIC19.17■□□□□ 0.66
KRT6AP02538 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms