Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-CO1P00395 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MT-CO1P00395 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.33■□□□□ 0.85
MT-CO1P00395 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.33■□□□□ 0.85
MT-CO1P00395 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MT-CO1P00395 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.33■□□□□ 0.85
MT-CO1P00395 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
MT-CO1P00395 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
MT-CO1P00395 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MT-CO1P00395 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MT-CO1P00395 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
MT-CO1P00395 AP005212.1-201ENST00000581547 1997 ntBASIC20.32■□□□□ 0.84
MT-CO1P00395 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-CO1P00395 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-CO1P00395 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-CO1P00395 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-CO1P00395 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-CO1P00395 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.32■□□□□ 0.84
MT-CO1P00395 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.32■□□□□ 0.84
MT-CO1P00395 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-CO1P00395 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
MT-CO1P00395 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-CO1P00395 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-CO1P00395 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.31■□□□□ 0.84
MT-CO1P00395 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.31■□□□□ 0.84
MT-CO1P00395 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MT-CO1P00395 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.31■□□□□ 0.84
MT-CO1P00395 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.31■□□□□ 0.84
MT-CO1P00395 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
MT-CO1P00395 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
MT-CO1P00395 AL023875.1-201ENST00000640777 796 ntBASIC20.31■□□□□ 0.84
MT-CO1P00395 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.31■□□□□ 0.84
MT-CO1P00395 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-CO1P00395 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MT-CO1P00395 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
MT-CO1P00395 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
MT-CO1P00395 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MT-CO1P00395 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.3■□□□□ 0.84
MT-CO1P00395 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.3■□□□□ 0.84
MT-CO1P00395 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.3■□□□□ 0.84
MT-CO1P00395 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.3■□□□□ 0.84
MT-CO1P00395 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.3■□□□□ 0.84
MT-CO1P00395 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.3■□□□□ 0.84
MT-CO1P00395 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
MT-CO1P00395 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-CO1P00395 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.29■□□□□ 0.84
MT-CO1P00395 AL512408.1-201ENST00000569378 2000 ntBASIC20.29■□□□□ 0.84
MT-CO1P00395 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.29■□□□□ 0.84
MT-CO1P00395 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
MT-CO1P00395 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
MT-CO1P00395 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
MT-CO1P00395 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
MT-CO1P00395 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.29■□□□□ 0.84
MT-CO1P00395 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.29■□□□□ 0.84
MT-CO1P00395 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.29■□□□□ 0.84
MT-CO1P00395 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
MT-CO1P00395 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
MT-CO1P00395 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-CO1P00395 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-CO1P00395 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-CO1P00395 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms