Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
LCMT2O60294 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LCMT2O60294 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.01■□□□□ 0.63
LCMT2O60294 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.01■□□□□ 0.63
LCMT2O60294 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 ESRRAP1-201ENST00000400596 1257 ntBASIC19.01■□□□□ 0.63
LCMT2O60294 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.01■□□□□ 0.63
LCMT2O60294 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.01■□□□□ 0.63
LCMT2O60294 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.01■□□□□ 0.63
LCMT2O60294 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.01■□□□□ 0.63
LCMT2O60294 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.01■□□□□ 0.63
LCMT2O60294 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.01■□□□□ 0.63
LCMT2O60294 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.01■□□□□ 0.63
LCMT2O60294 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LCMT2O60294 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCMT2O60294 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.01■□□□□ 0.63
LCMT2O60294 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.01■□□□□ 0.63
LCMT2O60294 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19■□□□□ 0.63
LCMT2O60294 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19■□□□□ 0.63
LCMT2O60294 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19■□□□□ 0.63
LCMT2O60294 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19■□□□□ 0.63
LCMT2O60294 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19■□□□□ 0.63
LCMT2O60294 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19■□□□□ 0.63
LCMT2O60294 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19■□□□□ 0.63
LCMT2O60294 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19■□□□□ 0.63
LCMT2O60294 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19■□□□□ 0.63
LCMT2O60294 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LCMT2O60294 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19■□□□□ 0.63
LCMT2O60294 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19■□□□□ 0.63
LCMT2O60294 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LCMT2O60294 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LCMT2O60294 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.99■□□□□ 0.63
LCMT2O60294 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LCMT2O60294 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LCMT2O60294 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 POM121L13P-201ENST00000422362 380 ntBASIC18.99■□□□□ 0.63
LCMT2O60294 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.99■□□□□ 0.63
LCMT2O60294 TSPY20P-201ENST00000450910 630 ntBASIC18.99■□□□□ 0.63
LCMT2O60294 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.99■□□□□ 0.63
LCMT2O60294 PHGDH-210ENST00000641115 1638 ntBASIC18.99■□□□□ 0.63
LCMT2O60294 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.99■□□□□ 0.63
LCMT2O60294 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.99■□□□□ 0.63
LCMT2O60294 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LCMT2O60294 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LCMT2O60294 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LCMT2O60294 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LCMT2O60294 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LCMT2O60294 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LCMT2O60294 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LCMT2O60294 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LCMT2O60294 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LCMT2O60294 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
LCMT2O60294 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.98■□□□□ 0.63
LCMT2O60294 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.98■□□□□ 0.63
LCMT2O60294 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.98■□□□□ 0.63
LCMT2O60294 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.98■□□□□ 0.63
LCMT2O60294 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LCMT2O60294 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LCMT2O60294 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.98■□□□□ 0.63
LCMT2O60294 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.98■□□□□ 0.63
LCMT2O60294 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LCMT2O60294 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.97■□□□□ 0.63
LCMT2O60294 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.97■□□□□ 0.63
LCMT2O60294 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.97■□□□□ 0.63
LCMT2O60294 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.97■□□□□ 0.63
LCMT2O60294 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.97■□□□□ 0.63
LCMT2O60294 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms