Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.49■□□□□ 0.55
PRKNO60260 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.49■□□□□ 0.55
PRKNO60260 AC142381.4-202ENST00000563973 229 ntBASIC18.49■□□□□ 0.55
PRKNO60260 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.49■□□□□ 0.55
PRKNO60260 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRKNO60260 MTDHP1-201ENST00000605323 784 ntBASIC18.49■□□□□ 0.55
PRKNO60260 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
PRKNO60260 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKNO60260 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKNO60260 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.49■□□□□ 0.55
PRKNO60260 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.49■□□□□ 0.55
PRKNO60260 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRKNO60260 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKNO60260 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKNO60260 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRKNO60260 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.49■□□□□ 0.55
PRKNO60260 AL691432.2-201ENST00000607222 2038 ntBASIC18.49■□□□□ 0.55
PRKNO60260 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
PRKNO60260 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKNO60260 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRKNO60260 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKNO60260 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRKNO60260 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 AL158047.1-201ENST00000445918 881 ntBASIC18.48■□□□□ 0.55
PRKNO60260 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PRKNO60260 C1QBPP2-201ENST00000528754 825 ntBASIC18.48■□□□□ 0.55
PRKNO60260 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKNO60260 AL359736.2-201ENST00000621992 437 ntBASIC18.48■□□□□ 0.55
PRKNO60260 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.48■□□□□ 0.55
PRKNO60260 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRKNO60260 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PRKNO60260 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRKNO60260 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PRKNO60260 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.47■□□□□ 0.55
PRKNO60260 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.47■□□□□ 0.55
PRKNO60260 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.47■□□□□ 0.55
PRKNO60260 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.47■□□□□ 0.55
PRKNO60260 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.47■□□□□ 0.55
PRKNO60260 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.47■□□□□ 0.55
PRKNO60260 RPPH1-201ENST00000516869 333 ntBASIC18.47■□□□□ 0.55
PRKNO60260 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.47■□□□□ 0.55
PRKNO60260 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.47■□□□□ 0.55
PRKNO60260 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PRKNO60260 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRKNO60260 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PRKNO60260 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKNO60260 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PRKNO60260 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRKNO60260 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRKNO60260 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.46■□□□□ 0.55
PRKNO60260 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKNO60260 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKNO60260 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.46■□□□□ 0.55
PRKNO60260 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
PRKNO60260 AL023875.1-201ENST00000640777 796 ntBASIC18.46■□□□□ 0.55
PRKNO60260 AC066615.1-201ENST00000640911 628 ntBASIC18.46■□□□□ 0.55
PRKNO60260 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.46■□□□□ 0.55
PRKNO60260 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PRKNO60260 BX119927.1-201ENST00000636596 1552 ntBASIC18.46■□□□□ 0.55
PRKNO60260 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.46■□□□□ 0.55
PRKNO60260 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRKNO60260 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.46■□□□□ 0.55
PRKNO60260 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
PRKNO60260 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.45■□□□□ 0.54
PRKNO60260 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.45■□□□□ 0.54
PRKNO60260 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.45■□□□□ 0.54
PRKNO60260 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.45■□□□□ 0.54
PRKNO60260 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.45■□□□□ 0.54
PRKNO60260 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PRKNO60260 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PRKNO60260 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PRKNO60260 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRKNO60260 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PRKNO60260 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.44■□□□□ 0.54
PRKNO60260 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms