Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDH7O60245 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDH7O60245 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCDH7O60245 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH7O60245 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH7O60245 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH7O60245 AC009237.14-201ENST00000609975 1594 ntBASIC18.95■□□□□ 0.62
PCDH7O60245 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH7O60245 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH7O60245 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDH7O60245 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PCDH7O60245 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.95■□□□□ 0.62
PCDH7O60245 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH7O60245 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH7O60245 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.95■□□□□ 0.62
PCDH7O60245 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDH7O60245 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH7O60245 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH7O60245 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH7O60245 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH7O60245 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDH7O60245 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH7O60245 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDH7O60245 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 GPX1P1-201ENST00000388829 606 ntBASIC18.94■□□□□ 0.62
PCDH7O60245 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH7O60245 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 AL121832.2-201ENST00000610979 668 ntBASIC18.94■□□□□ 0.62
PCDH7O60245 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH7O60245 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH7O60245 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH7O60245 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDH7O60245 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH7O60245 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH7O60245 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH7O60245 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PCDH7O60245 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH7O60245 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PCDH7O60245 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDH7O60245 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH7O60245 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDH7O60245 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH7O60245 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH7O60245 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH7O60245 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH7O60245 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH7O60245 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH7O60245 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH7O60245 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH7O60245 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH7O60245 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
PCDH7O60245 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDH7O60245 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH7O60245 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH7O60245 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH7O60245 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDH7O60245 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH7O60245 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH7O60245 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH7O60245 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH7O60245 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH7O60245 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDH7O60245 AC083906.2-201ENST00000511578 360 ntBASIC18.92■□□□□ 0.62
PCDH7O60245 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDH7O60245 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH7O60245 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDH7O60245 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDH7O60245 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH7O60245 AP001271.2-201ENST00000624018 1556 ntBASIC18.92■□□□□ 0.62
PCDH7O60245 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDH7O60245 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH7O60245 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH7O60245 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDH7O60245 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH7O60245 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH7O60245 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH7O60245 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH7O60245 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDH7O60245 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH7O60245 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH7O60245 MIPEPP3-201ENST00000412105 444 ntBASIC18.91■□□□□ 0.62
PCDH7O60245 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDH7O60245 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDH7O60245 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH7O60245 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH7O60245 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH7O60245 PHGDH-210ENST00000641115 1638 ntBASIC18.91■□□□□ 0.62
PCDH7O60245 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH7O60245 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH7O60245 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH7O60245 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH7O60245 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms