Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 KRT8P20-201ENST00000423953 1409 ntBASIC19.72■□□□□ 0.75
PHGDHO43175 KRT16P6-202ENST00000425692 1426 ntBASIC19.72■□□□□ 0.75
PHGDHO43175 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.72■□□□□ 0.75
PHGDHO43175 AC093484.2-201ENST00000580996 2166 ntBASIC19.72■□□□□ 0.75
PHGDHO43175 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.72■□□□□ 0.75
PHGDHO43175 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.72■□□□□ 0.75
PHGDHO43175 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 AC009237.14-201ENST00000609975 1594 ntBASIC19.71■□□□□ 0.75
PHGDHO43175 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PHGDHO43175 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.71■□□□□ 0.75
PHGDHO43175 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.71■□□□□ 0.75
PHGDHO43175 AC010980.2-201ENST00000587099 1412 ntBASIC19.71■□□□□ 0.75
PHGDHO43175 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.71■□□□□ 0.75
PHGDHO43175 AC093787.1-201ENST00000450396 207 ntBASIC19.71■□□□□ 0.75
PHGDHO43175 MIR5787-201ENST00000611784 55 ntBASIC19.71■□□□□ 0.75
PHGDHO43175 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.71■□□□□ 0.75
PHGDHO43175 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHGDHO43175 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PHGDHO43175 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.7■□□□□ 0.74
PHGDHO43175 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.7■□□□□ 0.74
PHGDHO43175 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PHGDHO43175 AC004911.1-201ENST00000416316 871 ntBASIC19.7■□□□□ 0.74
PHGDHO43175 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.7■□□□□ 0.74
PHGDHO43175 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.7■□□□□ 0.74
PHGDHO43175 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 KRT17P1-201ENST00000399211 1546 ntBASIC19.7■□□□□ 0.74
PHGDHO43175 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHGDHO43175 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PHGDHO43175 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.69■□□□□ 0.74
PHGDHO43175 AC022517.1-201ENST00000592429 346 ntBASIC19.69■□□□□ 0.74
PHGDHO43175 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.69■□□□□ 0.74
PHGDHO43175 AC005332.7-201ENST00000614046 2005 ntBASIC19.69■□□□□ 0.74
PHGDHO43175 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.69■□□□□ 0.74
PHGDHO43175 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHGDHO43175 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.69■□□□□ 0.74
PHGDHO43175 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PHGDHO43175 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.69■□□□□ 0.74
PHGDHO43175 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.69■□□□□ 0.74
PHGDHO43175 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.68■□□□□ 0.74
PHGDHO43175 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.68■□□□□ 0.74
PHGDHO43175 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.68■□□□□ 0.74
PHGDHO43175 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PHGDHO43175 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.68■□□□□ 0.74
PHGDHO43175 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.68■□□□□ 0.74
PHGDHO43175 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.68■□□□□ 0.74
PHGDHO43175 AL589743.5-201ENST00000616611 1050 ntBASIC19.68■□□□□ 0.74
PHGDHO43175 OR10C1-204ENST00000622521 1039 ntBASIC19.68■□□□□ 0.74
PHGDHO43175 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PHGDHO43175 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PHGDHO43175 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms