Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC28A1O00337 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.11■□□□□ 0.65
SLC28A1O00337 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SLC28A1O00337 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC28A1O00337 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A1O00337 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SLC28A1O00337 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC28A1O00337 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A1O00337 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A1O00337 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A1O00337 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC28A1O00337 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC28A1O00337 AC010980.2-201ENST00000587099 1412 ntBASIC19.1■□□□□ 0.65
SLC28A1O00337 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC28A1O00337 AIRN-201ENST00000601203 4374 ntBASIC19.1■□□□□ 0.65
SLC28A1O00337 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC28A1O00337 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 AC023632.3-201ENST00000521633 145 ntBASIC19.1■□□□□ 0.65
SLC28A1O00337 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 C2orf69P4-201ENST00000565394 541 ntBASIC19.1■□□□□ 0.65
SLC28A1O00337 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC28A1O00337 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC28A1O00337 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A1O00337 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 BX323043.1-201ENST00000641006 1765 ntBASIC19.09■□□□□ 0.65
SLC28A1O00337 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC28A1O00337 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A1O00337 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SLC28A1O00337 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A1O00337 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC28A1O00337 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC28A1O00337 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC28A1O00337 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A1O00337 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC28A1O00337 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A1O00337 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A1O00337 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SLC28A1O00337 AC005332.7-201ENST00000614046 2005 ntBASIC19.08■□□□□ 0.65
SLC28A1O00337 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A1O00337 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SLC28A1O00337 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.08■□□□□ 0.65
SLC28A1O00337 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A1O00337 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SLC28A1O00337 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A1O00337 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC28A1O00337 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.08■□□□□ 0.65
SLC28A1O00337 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A1O00337 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.08■□□□□ 0.65
SLC28A1O00337 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A1O00337 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC28A1O00337 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A1O00337 AL512625.2-201ENST00000417533 625 ntBASIC19.08■□□□□ 0.64
SLC28A1O00337 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.08■□□□□ 0.64
SLC28A1O00337 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A1O00337 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A1O00337 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC28A1O00337 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC28A1O00337 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC28A1O00337 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC28A1O00337 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC28A1O00337 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.07■□□□□ 0.64
SLC28A1O00337 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
SLC28A1O00337 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 AC093484.2-201ENST00000580996 2166 ntBASIC19.07■□□□□ 0.64
SLC28A1O00337 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC28A1O00337 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC28A1O00337 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A1O00337 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A1O00337 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A1O00337 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC28A1O00337 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A1O00337 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms