Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 AC093484.2-201ENST00000580996 2166 ntBASIC19.46■□□□□ 0.71
VGLL3A8MV65 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 KRT18P10-201ENST00000388836 1287 ntBASIC19.46■□□□□ 0.71
VGLL3A8MV65 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.46■□□□□ 0.71
VGLL3A8MV65 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VGLL3A8MV65 OXCT2P1-201ENST00000447263 1535 ntBASIC19.46■□□□□ 0.71
VGLL3A8MV65 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
VGLL3A8MV65 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.45■□□□□ 0.7
VGLL3A8MV65 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.45■□□□□ 0.7
VGLL3A8MV65 DUX4L18-201ENST00000553347 1267 ntBASIC19.45■□□□□ 0.7
VGLL3A8MV65 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 AC008741.2-201ENST00000612792 3115 ntBASIC19.45■□□□□ 0.7
VGLL3A8MV65 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VGLL3A8MV65 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VGLL3A8MV65 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VGLL3A8MV65 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VGLL3A8MV65 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.44■□□□□ 0.7
VGLL3A8MV65 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VGLL3A8MV65 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
VGLL3A8MV65 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VGLL3A8MV65 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.43■□□□□ 0.7
VGLL3A8MV65 AC074183.2-201ENST00000623112 922 ntBASIC19.43■□□□□ 0.7
VGLL3A8MV65 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VGLL3A8MV65 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.43■□□□□ 0.7
VGLL3A8MV65 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.43■□□□□ 0.7
VGLL3A8MV65 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VGLL3A8MV65 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms