Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf47A7E2U8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 AL031133.1-201ENST00000406807 723 ntBASIC19.46■□□□□ 0.71
C4orf47A7E2U8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.46■□□□□ 0.71
C4orf47A7E2U8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 INGX-201ENST00000359239 846 ntBASIC19.45■□□□□ 0.7
C4orf47A7E2U8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.45■□□□□ 0.7
C4orf47A7E2U8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 FAM87A-204ENST00000613235 858 ntBASIC19.45■□□□□ 0.7
C4orf47A7E2U8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.45■□□□□ 0.7
C4orf47A7E2U8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 FAM8A6P-201ENST00000407496 1135 ntBASIC19.44■□□□□ 0.7
C4orf47A7E2U8 AC009947.2-201ENST00000444014 672 ntBASIC19.44■□□□□ 0.7
C4orf47A7E2U8 AC091390.4-202ENST00000476426 537 ntBASIC19.44■□□□□ 0.7
C4orf47A7E2U8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 AC097488.1-201ENST00000507834 756 ntBASIC19.44■□□□□ 0.7
C4orf47A7E2U8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 AC139887.4-201ENST00000607877 719 ntBASIC19.44■□□□□ 0.7
C4orf47A7E2U8 AP000550.4-202ENST00000639755 178 ntBASIC19.44■□□□□ 0.7
C4orf47A7E2U8 MYC-208ENST00000641036 567 ntBASIC19.44■□□□□ 0.7
C4orf47A7E2U8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf47A7E2U8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 AC026396.1-201ENST00000419388 421 ntBASIC19.43■□□□□ 0.7
C4orf47A7E2U8 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.43■□□□□ 0.7
C4orf47A7E2U8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.43■□□□□ 0.7
C4orf47A7E2U8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms