Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 BX842568.3-201ENST00000418104 571 ntBASIC14.03□□□□□ -0.16
LINC01546A6NGU7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01546A6NGU7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LINC01546A6NGU7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 IGHV3-19-201ENST00000521488 291 ntBASIC14.02□□□□□ -0.17
LINC01546A6NGU7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 AL512631.2-201ENST00000604634 923 ntBASIC14.02□□□□□ -0.17
LINC01546A6NGU7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01546A6NGU7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms