Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 AC009078.2-202ENST00000463353 338 ntBASIC19.08■□□□□ 0.64
CNOT1A5YKK6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 AC139530.3-201ENST00000620344 690 ntBASIC19.08■□□□□ 0.64
CNOT1A5YKK6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 AC092338.2-201ENST00000568827 1415 ntBASIC19.08■□□□□ 0.64
CNOT1A5YKK6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CNOT1A5YKK6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 AL023973.1-201ENST00000624619 620 ntBASIC19.07■□□□□ 0.64
CNOT1A5YKK6 AC127496.7-201ENST00000625110 1798 ntBASIC19.07■□□□□ 0.64
CNOT1A5YKK6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 RCC2P6-201ENST00000526625 1557 ntBASIC19.07■□□□□ 0.64
CNOT1A5YKK6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 CCR12P-201ENST00000446203 998 ntBASIC19.07■□□□□ 0.64
CNOT1A5YKK6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 MIR3180-1-201ENST00000580374 94 ntBASIC19.07■□□□□ 0.64
CNOT1A5YKK6 MIR3180-3-201ENST00000584616 94 ntBASIC19.07■□□□□ 0.64
CNOT1A5YKK6 AL671883.3-201ENST00000603274 991 ntBASIC19.07■□□□□ 0.64
CNOT1A5YKK6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CNOT1A5YKK6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 MIR3652-201ENST00000579335 131 ntBASIC19.06■□□□□ 0.64
CNOT1A5YKK6 C1orf229-201ENST00000623686 2258 ntBASIC19.06■□□□□ 0.64
CNOT1A5YKK6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 AC141257.4-201ENST00000634557 245 ntBASIC19.06■□□□□ 0.64
CNOT1A5YKK6 AC136944.6-201ENST00000634818 245 ntBASIC19.06■□□□□ 0.64
CNOT1A5YKK6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT1A5YKK6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 AC011484.1-201ENST00000377652 1995 ntBASIC19.05■□□□□ 0.64
CNOT1A5YKK6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 UNC93B7-201ENST00000509439 705 ntBASIC19.05■□□□□ 0.64
CNOT1A5YKK6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 AL441883.1-201ENST00000566170 1045 ntBASIC19.05■□□□□ 0.64
CNOT1A5YKK6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT1A5YKK6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms