Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 PTBP1P-201ENST00000554374 1601 ntBASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 AP001271.2-201ENST00000624018 1556 ntBASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCRBV3S1A0A5B6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCRBV3S1A0A5B6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 AC005332.8-201ENST00000622750 2735 ntBASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 AC135050.7-201ENST00000624508 2218 ntBASIC18.57■□□□□ 0.56
TCRBV3S1A0A5B6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 AL390961.4-201ENST00000623958 2535 ntBASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 AL136116.3-201ENST00000402907 1138 ntBASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 AL356652.1-201ENST00000615962 565 ntBASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 AL161938.1-201ENST00000569833 2180 ntBASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 RBM17P2-201ENST00000616397 1405 ntBASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.56■□□□□ 0.56
TCRBV3S1A0A5B6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 AC006333.2-201ENST00000607957 2099 ntBASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms