Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF103-CHMP3A0A140T963 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 AC087623.3-201ENST00000607047 1098 ntBASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 MIR6821-201ENST00000617625 74 ntBASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 AC010536.3-201ENST00000620306 533 ntBASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF103-CHMP3A0A140T963 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF103-CHMP3A0A140T963 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms