Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KRT8P20-201ENST00000423953 1409 ntBASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 NEFHP1-201ENST00000412845 2629 ntBASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC019069.1-201ENST00000610008 1333 ntBASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
TRBV6-1A0A0K0K1D8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AL136967.2-201ENST00000623968 743 ntBASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CYP21A1P-202ENST00000354927 1481 ntBASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms