Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 TERF1P5-201ENST00000477545 1207 ntBASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV21A0A0B4J279 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 AL162412.1-201ENST00000567129 965 ntBASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 KRT16P6-202ENST00000425692 1426 ntBASIC14.74□□□□□ -0.05
TRAV21A0A0B4J279 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 AC009237.14-201ENST00000609975 1594 ntBASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 AC010536.3-201ENST00000620306 533 ntBASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 TREX1-205ENST00000625293 1783 ntBASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV21A0A0B4J279 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 AC020763.4-201ENST00000623414 4170 ntBASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms