Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 AC023632.3-201ENST00000521633 145 ntBASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV5-3A0A0A0MS03 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 HLA-G-202ENST00000376815 851 ntBASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 HLA-G-203ENST00000376818 1127 ntBASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRBV5-3A0A0A0MS03 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 CYP2T1P-201ENST00000432607 1285 ntBASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 AC137761.2-201ENST00000561729 223 ntBASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 AC145350.3-201ENST00000569033 163 ntBASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 MIR6821-201ENST00000617625 74 ntBASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 LINC01465-201ENST00000408887 1940 ntBASIC18.59■□□□□ 0.57
TRBV5-3A0A0A0MS03 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms