Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 NPM1P14-201ENST00000343743 866 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 U3.14-201ENST00000365363 227 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 RN7SKP236-201ENST00000410635 284 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AL139415.1-201ENST00000424862 352 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 RPL14P5-201ENST00000436474 730 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC005517.1-201ENST00000452091 489 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 RN7SL145P-201ENST00000469955 296 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 RN7SL165P-201ENST00000477476 291 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC012123.2-201ENST00000485809 248 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 RPS20-202ENST00000518875 671 ntTSL 2 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC100854.1-201ENST00000520351 341 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC234775.3-201ENST00000564612 656 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 MIR4685-201ENST00000578185 69 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 LSM1P2-201ENST00000604911 322 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC068234.2-201ENST00000619646 522 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC241377.1-201ENST00000619797 406 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 BX005040.2-201ENST00000620504 370 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC012653.2-201ENST00000621880 420 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AL353684.1-201ENST00000622677 1120 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC026108.1-201ENST00000635444 547 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.87□□□□□ -1.47
RFT1Q96AA3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RFT1Q96AA3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFT1Q96AA3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFT1Q96AA3 LCN1P2-201ENST00000372030 223 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 AL360271.1-201ENST00000395679 510 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 AL050305.1-201ENST00000399993 1230 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 AL359715.1-201ENST00000404330 555 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 RNA5SP115-201ENST00000411160 107 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 RPS17P17-201ENST00000419392 409 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 GAPDHP53-201ENST00000458397 924 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 AL928654.1-201ENST00000476081 354 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 RN7SL187P-201ENST00000495587 303 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 IGHV3-57-201ENST00000520143 280 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 AP001803.1-201ENST00000525668 147 ntBASIC5.86□□□□□ -1.47
RFT1Q96AA3 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.86□□□□□ -1.47
RFT1Q96AA3 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms