Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC9.58□□□□□ -0.88
KDM5CP41229 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
KDM5CP41229 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
KDM5CP41229 UCK2-205ENST00000469256 753 ntTSL 3 BASIC9.58□□□□□ -0.88
KDM5CP41229 RN7SL326P-201ENST00000477493 296 ntBASIC9.58□□□□□ -0.88
KDM5CP41229 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC9.58□□□□□ -0.88
KDM5CP41229 AP001858.2-201ENST00000536213 601 ntBASIC9.58□□□□□ -0.88
KDM5CP41229 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC9.58□□□□□ -0.88
KDM5CP41229 AC073488.3-201ENST00000631611 778 ntBASIC9.58□□□□□ -0.88
KDM5CP41229 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
KDM5CP41229 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KDM5CP41229 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
KDM5CP41229 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC9.58□□□□□ -0.88
KDM5CP41229 SNORA21-201ENST00000362423 132 ntBASIC9.58□□□□□ -0.88
KDM5CP41229 SUMO2P3-201ENST00000438311 288 ntBASIC9.58□□□□□ -0.88
KDM5CP41229 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC9.58□□□□□ -0.88
KDM5CP41229 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC9.58□□□□□ -0.88
KDM5CP41229 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC9.58□□□□□ -0.88
KDM5CP41229 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC9.58□□□□□ -0.88
KDM5CP41229 AL021707.7-201ENST00000607991 416 ntBASIC9.58□□□□□ -0.88
KDM5CP41229 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC9.58□□□□□ -0.88
KDM5CP41229 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC9.58□□□□□ -0.88
KDM5CP41229 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC9.57□□□□□ -0.88
KDM5CP41229 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 OR7E25P-202ENST00000641088 5937 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC9.57□□□□□ -0.88
KDM5CP41229 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
KDM5CP41229 TMSB4XP2-201ENST00000335179 210 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 AL354890.1-201ENST00000413730 346 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 AL157884.1-201ENST00000424561 454 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 GAPDHP75-201ENST00000433910 943 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
KDM5CP41229 AC016908.1-201ENST00000442571 1219 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC9.57□□□□□ -0.88
KDM5CP41229 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC9.57□□□□□ -0.88
KDM5CP41229 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC9.57□□□□□ -0.88
KDM5CP41229 BNIP3P32-201ENST00000600015 554 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 MRPL57P1-201ENST00000621486 265 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 AL049767.1-202ENST00000637826 242 ntBASIC9.57□□□□□ -0.88
KDM5CP41229 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC9.57□□□□□ -0.88
KDM5CP41229 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KDM5CP41229 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
KDM5CP41229 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
KDM5CP41229 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
KDM5CP41229 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC9.56□□□□□ -0.88
KDM5CP41229 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KDM5CP41229 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
KDM5CP41229 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.56□□□□□ -0.88
KDM5CP41229 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC9.56□□□□□ -0.88
KDM5CP41229 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
KDM5CP41229 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KDM5CP41229 GTF3AP1-201ENST00000416942 1004 ntBASIC9.56□□□□□ -0.88
KDM5CP41229 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.56□□□□□ -0.88
KDM5CP41229 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC9.56□□□□□ -0.88
KDM5CP41229 RPL34P33-201ENST00000486062 334 ntBASIC9.56□□□□□ -0.88
KDM5CP41229 RN7SL714P-201ENST00000487050 298 ntBASIC9.56□□□□□ -0.88
KDM5CP41229 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC9.56□□□□□ -0.88
KDM5CP41229 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC9.56□□□□□ -0.88
KDM5CP41229 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC9.56□□□□□ -0.88
KDM5CP41229 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC9.56□□□□□ -0.88
KDM5CP41229 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
KDM5CP41229 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KDM5CP41229 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KDM5CP41229 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC9.56□□□□□ -0.88
KDM5CP41229 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC9.56□□□□□ -0.88
KDM5CP41229 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KDM5CP41229 AC020978.8-201ENST00000571975 3022 ntBASIC9.56□□□□□ -0.88
KDM5CP41229 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC9.56□□□□□ -0.88
KDM5CP41229 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC9.56□□□□□ -0.88
KDM5CP41229 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC9.56□□□□□ -0.88
KDM5CP41229 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
KDM5CP41229 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
KDM5CP41229 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
KDM5CP41229 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC9.55□□□□□ -0.88
KDM5CP41229 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC9.55□□□□□ -0.88
KDM5CP41229 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms