Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGA1P17096 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 RNA5SP433-201ENST00000364491 114 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGA1P17096 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGA1P17096 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.7□□□□□ -1.34
HMGA1P17096 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGA1P17096 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGA1P17096 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGA1P17096 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGA1P17096 AC010240.2-201ENST00000445363 1205 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.7□□□□□ -1.34
HMGA1P17096 AC144530.1-201ENST00000452862 555 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 RN7SL369P-201ENST00000477138 299 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 KHDC1P1-201ENST00000511053 508 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGA1P17096 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.7□□□□□ -1.34
HMGA1P17096 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGA1P17096 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGA1P17096 AC002310.3-201ENST00000569728 723 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 MIR4310-201ENST00000582950 57 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGA1P17096 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HMGA1P17096 OR7E91P-202ENST00000642062 1198 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HMGA1P17096 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC6.7□□□□□ -1.34
HMGA1P17096 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HMGA1P17096 AC092646.2-201ENST00000431242 2095 ntBASIC6.7□□□□□ -1.34
HMGA1P17096 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
HMGA1P17096 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGA1P17096 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGA1P17096 AC010624.4-201ENST00000597606 1351 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
HMGA1P17096 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGA1P17096 AC011592.1-201ENST00000624647 3634 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.69□□□□□ -1.34
HMGA1P17096 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
HMGA1P17096 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 USP13-203ENST00000496897 2747 ntTSL 2 BASIC6.69□□□□□ -1.34
HMGA1P17096 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HMGA1P17096 AL023284.3-201ENST00000407767 334 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 RN7SKP240-201ENST00000410583 375 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGA1P17096 AL139415.1-201ENST00000424862 352 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 SOCS5P1-201ENST00000440415 949 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 AL645936.1-201ENST00000441979 518 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HMGA1P17096 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.69□□□□□ -1.34
HMGA1P17096 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGA1P17096 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
HMGA1P17096 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGA1P17096 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGA1P17096 AC095052.1-201ENST00000509955 863 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 AC009879.1-201ENST00000520029 839 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 IGLV3-6-201ENST00000523937 250 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGA1P17096 AC005332.4-201ENST00000592752 579 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 SNORA74.4-201ENST00000607595 199 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGA1P17096 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGA1P17096 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGA1P17096 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGA1P17096 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 AL136531.3-201ENST00000624378 3658 ntBASIC6.69□□□□□ -1.34
HMGA1P17096 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.69□□□□□ -1.34
HMGA1P17096 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGA1P17096 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.69□□□□□ -1.34
HMGA1P17096 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMGA1P17096 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.69□□□□□ -1.34
HMGA1P17096 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGA1P17096 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGA1P17096 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGA1P17096 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGA1P17096 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGA1P17096 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
HMGA1P17096 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 502.9 ms