Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 RNA5SP433-201ENST00000364491 114 ntBASIC9.51□□□□□ -0.89
HFM1A2PYH4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 AC092865.3-201ENST00000425390 1026 ntBASIC9.51□□□□□ -0.89
HFM1A2PYH4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 AL590004.3-202ENST00000445883 451 ntBASIC9.51□□□□□ -0.89
HFM1A2PYH4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 AC022206.1-201ENST00000495947 347 ntBASIC9.51□□□□□ -0.89
HFM1A2PYH4 RN7SL104P-201ENST00000498686 293 ntBASIC9.51□□□□□ -0.89
HFM1A2PYH4 AL845552.1-201ENST00000556820 323 ntBASIC9.51□□□□□ -0.89
HFM1A2PYH4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 AC022400.9-201ENST00000623633 273 ntBASIC9.51□□□□□ -0.89
HFM1A2PYH4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC9.51□□□□□ -0.89
HFM1A2PYH4 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 AP000866.6-201ENST00000638898 3579 ntBASIC9.51□□□□□ -0.89
HFM1A2PYH4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
HFM1A2PYH4 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
HFM1A2PYH4 AC011742.2-201ENST00000443818 352 ntBASIC9.5□□□□□ -0.89
HFM1A2PYH4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 NDUFA5P5-201ENST00000468361 342 ntBASIC9.5□□□□□ -0.89
HFM1A2PYH4 RN7SL714P-201ENST00000487050 298 ntBASIC9.5□□□□□ -0.89
HFM1A2PYH4 SNX18P25-201ENST00000510539 758 ntBASIC9.5□□□□□ -0.89
HFM1A2PYH4 AC073581.1-201ENST00000519036 575 ntBASIC9.5□□□□□ -0.89
HFM1A2PYH4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
HFM1A2PYH4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 AC002310.3-201ENST00000569728 723 ntBASIC9.5□□□□□ -0.89
HFM1A2PYH4 AC097467.4-201ENST00000605504 141 ntBASIC9.5□□□□□ -0.89
HFM1A2PYH4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
HFM1A2PYH4 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
HFM1A2PYH4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC9.5□□□□□ -0.89
HFM1A2PYH4 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
HFM1A2PYH4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
HFM1A2PYH4 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AL031651.1-201ENST00000615357 1438 ntBASIC9.49□□□□□ -0.89
HFM1A2PYH4 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AL133351.3-201ENST00000454998 193 ntBASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC068522.1-201ENST00000482895 345 ntBASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AL109924.4-201ENST00000623089 670 ntBASIC9.49□□□□□ -0.89
HFM1A2PYH4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC018717.1-201ENST00000457712 1505 ntBASIC9.49□□□□□ -0.89
HFM1A2PYH4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AP002370.1-201ENST00000528055 1602 ntBASIC9.49□□□□□ -0.89
HFM1A2PYH4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
HFM1A2PYH4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC9.49□□□□□ -0.89
HFM1A2PYH4 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 RN7SKP275-201ENST00000364626 301 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC017035.1-201ENST00000411999 1115 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms