Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.57□□□□□ -1.2
RSPO4Q2I0M5 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 OR9K2-201ENST00000305377 1122 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 FUNDC2P3-201ENST00000334716 533 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 RNU4-92P-201ENST00000363783 136 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 VTRNA1-2-201ENST00000365241 89 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 Y_RNA.535-201ENST00000384612 99 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC016769.2-201ENST00000414815 475 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 RPS27AP7-201ENST00000422792 455 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 KCTD9P1-201ENST00000430462 1167 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 TRIM60P3Y-201ENST00000432201 673 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 Z97634.1-203ENST00000435229 471 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 PTENP1-201ENST00000447117 1215 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AL356390.1-201ENST00000455684 397 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 RN7SL655P-201ENST00000486087 298 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 CBX3P3-201ENST00000508108 532 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC008885.2-201ENST00000509506 930 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC093752.1-206ENST00000511823 336 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC092593.2-201ENST00000513866 913 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 NPM1P6-201ENST00000521088 871 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AP000873.5-201ENST00000533906 236 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AL356019.2-201ENST00000556738 3829 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC026470.2-201ENST00000561492 181 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC138749.2-201ENST00000566048 167 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 GMFG-204ENST00000595636 487 ntTSL 2 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC027243.2-201ENST00000602530 724 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AL354760.1-201ENST00000608357 643 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC004948.1-201ENST00000609858 672 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AL645927.2-201ENST00000618350 349 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC022079.2-201ENST00000619739 566 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 FRG1KP-201ENST00000623592 341 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC012557.3-201ENST00000626439 255 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC136428.3-201ENST00000566387 1990 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 PPBPP2-201ENST00000513150 1362 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC009220.2-201ENST00000489759 1751 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 AC012467.2-201ENST00000607783 2583 ntBASIC7.56□□□□□ -1.2
RSPO4Q2I0M5 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms