Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.68□□□□□ -1.34
LIMK2P53671 KCTD9P4-201ENST00000526766 1166 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.68□□□□□ -1.34
LIMK2P53671 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.68□□□□□ -1.34
LIMK2P53671 MRPS21P9-201ENST00000571150 257 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 AC137695.1-201ENST00000604126 489 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 AC097467.4-201ENST00000605504 141 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 MIR6780B-201ENST00000610307 79 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
LIMK2P53671 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
LIMK2P53671 AC087269.2-201ENST00000641764 975 ntBASIC6.68□□□□□ -1.34
LIMK2P53671 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
LIMK2P53671 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.68□□□□□ -1.34
LIMK2P53671 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIMK2P53671 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
LIMK2P53671 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.67□□□□□ -1.34
LIMK2P53671 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMK2P53671 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMK2P53671 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.67□□□□□ -1.34
LIMK2P53671 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 STAG3L4-201ENST00000352103 530 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 RNU1-5P-201ENST00000362684 144 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.67□□□□□ -1.34
LIMK2P53671 AL049697.3-201ENST00000406493 982 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMK2P53671 CDC42P6-201ENST00000421246 576 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 AL139415.1-201ENST00000424862 352 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMK2P53671 AL590128.1-201ENST00000433407 286 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMK2P53671 RN7SL654P-201ENST00000479178 292 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 AC092824.1-201ENST00000483524 576 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 AL117692.1-201ENST00000494283 713 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMK2P53671 OR52K3P-201ENST00000531655 943 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.67□□□□□ -1.34
LIMK2P53671 AL590032.1-201ENST00000604920 252 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC127071.2-201ENST00000623293 527 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
LIMK2P53671 AC005332.9-201ENST00000620266 2921 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 ZNF806-201ENST00000438300 1774 ntBASIC6.67□□□□□ -1.34
LIMK2P53671 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
LIMK2P53671 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMK2P53671 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
LIMK2P53671 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMK2P53671 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMK2P53671 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
LIMK2P53671 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMK2P53671 LCOR-201ENST00000286067 4542 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 CASC19-228ENST00000641414 1684 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMK2P53671 FAM32BP-201ENST00000344033 333 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMK2P53671 RNA5SP474-201ENST00000391234 90 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 SNORA11.5-201ENST00000408163 128 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 RNA5SP155-201ENST00000411154 129 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 GAPDHP19-201ENST00000431768 1005 ntBASIC6.66□□□□□ -1.34
LIMK2P53671 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms