Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC026458.1-201ENST00000564330 438 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 RN7SL199P-201ENST00000578752 281 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 RN7SL656P-201ENST00000579044 281 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 RN7SL404P-201ENST00000582421 281 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC011921.2-201ENST00000589465 152 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC137695.1-201ENST00000604126 489 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC245407.2-201ENST00000614199 451 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC012653.2-201ENST00000621880 420 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC005753.1-201ENST00000623837 618 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC073857.1-201ENST00000625082 1054 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC099654.15-201ENST00000639802 509 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DMBP28068 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DMBP28068 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC007012.2-201ENST00000623206 1676 ntBASIC5.08□□□□□ -1.6
HLA-DMBP28068 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HLA-DMBP28068 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DMBP28068 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 MTCO1P25-201ENST00000414449 1799 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 RNA5SP333-201ENST00000363466 118 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 RNA5SP334-201ENST00000364825 118 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 MIR187-201ENST00000385062 109 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC091492.1-201ENST00000419844 272 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 SNRPEP5-201ENST00000425442 278 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 PAICSP2-201ENST00000429118 1150 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AL451136.1-201ENST00000435399 325 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC009518.3-201ENST00000438972 253 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AL139156.3-201ENST00000454802 394 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AL096803.1-201ENST00000456921 1021 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC022730.1-201ENST00000473114 568 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 SNX18P23-201ENST00000510867 677 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 DCAF13P2-201ENST00000514188 555 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC096661.1-201ENST00000515870 822 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 IGLC4-201ENST00000517690 248 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 IGHV3-57-201ENST00000520143 280 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 MIR5682-201ENST00000584864 76 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC106782.7-201ENST00000624024 418 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 AC133555.5-201ENST00000624430 418 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 AL355377.1-201ENST00000621125 1653 ntBASIC5.07□□□□□ -1.6
HLA-DMBP28068 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DMBP28068 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DMBP28068 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms