Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RFC3P40938 OR7A2P-201ENST00000304105 930 ntBASIC6.2□□□□□ -1.42
RFC3P40938 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 RN7SKP62-201ENST00000384539 329 ntBASIC6.2□□□□□ -1.42
RFC3P40938 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RFC3P40938 AL590635.1-201ENST00000406314 586 ntBASIC6.2□□□□□ -1.42
RFC3P40938 RN7SKP38-201ENST00000410782 309 ntBASIC6.2□□□□□ -1.42
RFC3P40938 UBTFL2-201ENST00000411859 1191 ntBASIC6.2□□□□□ -1.42
RFC3P40938 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.2□□□□□ -1.42
RFC3P40938 RPL7AP51-201ENST00000422016 760 ntBASIC6.2□□□□□ -1.42
RFC3P40938 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.2□□□□□ -1.42
RFC3P40938 HMGN1P6-201ENST00000438508 291 ntBASIC6.2□□□□□ -1.42
RFC3P40938 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 RPS4XP23-201ENST00000487801 237 ntBASIC6.2□□□□□ -1.42
RFC3P40938 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 RN7SL187P-201ENST00000495587 303 ntBASIC6.2□□□□□ -1.42
RFC3P40938 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC3P40938 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC3P40938 RN7SKP196-201ENST00000516267 345 ntBASIC6.2□□□□□ -1.42
RFC3P40938 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC3P40938 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 SNRPCP6-201ENST00000528310 210 ntBASIC6.2□□□□□ -1.42
RFC3P40938 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 OR4A21P-201ENST00000532759 944 ntBASIC6.2□□□□□ -1.42
RFC3P40938 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 AC007068.2-201ENST00000543168 395 ntBASIC6.2□□□□□ -1.42
RFC3P40938 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC3P40938 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.2□□□□□ -1.42
RFC3P40938 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 DIMT1P1-201ENST00000603970 763 ntBASIC6.2□□□□□ -1.42
RFC3P40938 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.2□□□□□ -1.42
RFC3P40938 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RFC3P40938 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 AC010401.2-201ENST00000575137 4934 ntBASIC6.2□□□□□ -1.42
RFC3P40938 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.2□□□□□ -1.42
RFC3P40938 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RFC3P40938 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFC3P40938 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RFC3P40938 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
RFC3P40938 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC3P40938 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC3P40938 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC3P40938 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RFC3P40938 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC3P40938 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 SNORA64.3-201ENST00000365647 134 ntBASIC6.19□□□□□ -1.42
RFC3P40938 PPIAP26-201ENST00000377951 522 ntBASIC6.19□□□□□ -1.42
RFC3P40938 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RFC3P40938 AC026310.1-201ENST00000396004 378 ntBASIC6.19□□□□□ -1.42
RFC3P40938 RPL12P23-201ENST00000405880 490 ntBASIC6.19□□□□□ -1.42
RFC3P40938 CYCSP17-201ENST00000407870 315 ntBASIC6.19□□□□□ -1.42
RFC3P40938 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC3P40938 GAPDHP57-201ENST00000424400 585 ntBASIC6.19□□□□□ -1.42
RFC3P40938 PAICSP2-201ENST00000429118 1150 ntBASIC6.19□□□□□ -1.42
RFC3P40938 AC245291.3-201ENST00000443400 292 ntBASIC6.19□□□□□ -1.42
RFC3P40938 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC3P40938 AL034399.1-201ENST00000451535 380 ntBASIC6.19□□□□□ -1.42
RFC3P40938 RBMY2HP-201ENST00000457961 720 ntBASIC6.19□□□□□ -1.42
RFC3P40938 RPS14P8-201ENST00000478778 369 ntBASIC6.19□□□□□ -1.42
RFC3P40938 AC068522.1-201ENST00000482895 345 ntBASIC6.19□□□□□ -1.42
RFC3P40938 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.19□□□□□ -1.42
RFC3P40938 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC3P40938 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC3P40938 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 RPL29P33-201ENST00000587474 316 ntBASIC6.19□□□□□ -1.42
RFC3P40938 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.19□□□□□ -1.42
RFC3P40938 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.19□□□□□ -1.42
RFC3P40938 AC061999.1-201ENST00000624454 177 ntBASIC6.19□□□□□ -1.42
RFC3P40938 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.19□□□□□ -1.42
RFC3P40938 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 AC089998.1-201ENST00000548575 3141 ntBASIC6.19□□□□□ -1.42
RFC3P40938 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 AC078880.4-201ENST00000617627 1749 ntBASIC6.19□□□□□ -1.42
RFC3P40938 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFC3P40938 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RFC3P40938 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms