Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 AP003175.1-201ENST00000641383 6658 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HMGA1P17096 SNORA11.3-201ENST00000408471 128 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 Z68868.1-201ENST00000429048 544 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 RPSAP65-201ENST00000429660 595 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 IGHV3-57-201ENST00000520143 280 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.78□□□□□ -1.32
HMGA1P17096 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 TPRX1P1-201ENST00000557620 319 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGA1P17096 RN7SL366P-201ENST00000577957 292 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGA1P17096 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGA1P17096 AC025171.4-201ENST00000607250 1047 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 SNORA11.6-201ENST00000619030 128 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 AC012653.2-201ENST00000621880 420 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 AC130448.2-201ENST00000624082 374 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 AKAP17BP-201ENST00000431706 2719 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMGA1P17096 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGA1P17096 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGA1P17096 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGA1P17096 AL139384.2-201ENST00000613809 3590 ntBASIC6.78□□□□□ -1.32
HMGA1P17096 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HMGA1P17096 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGA1P17096 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
HMGA1P17096 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGA1P17096 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGA1P17096 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGA1P17096 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
HMGA1P17096 AC012213.2-201ENST00000562917 4597 ntBASIC6.77□□□□□ -1.32
HMGA1P17096 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.32
HMGA1P17096 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.32
HMGA1P17096 BX322650.1-201ENST00000332359 2143 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.77□□□□□ -1.33
HMGA1P17096 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGA1P17096 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 STAG3L4-201ENST00000352103 530 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGA1P17096 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGA1P17096 CYCSP52-201ENST00000422857 310 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 AC002069.1-201ENST00000429649 1159 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 RPL5P10-201ENST00000445207 894 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.77□□□□□ -1.33
HMGA1P17096 PFN1P8-201ENST00000497012 543 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.77□□□□□ -1.33
HMGA1P17096 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGA1P17096 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGA1P17096 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.77□□□□□ -1.33
HMGA1P17096 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGA1P17096 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGA1P17096 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGA1P17096 GLYATL1P2-202ENST00000588046 902 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGA1P17096 AC124916.2-201ENST00000604416 224 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGA1P17096 MIR6811-201ENST00000620409 58 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGA1P17096 MIR1910-201ENST00000636955 80 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HMGA1P17096 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGA1P17096 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGA1P17096 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HMGA1P17096 AC083806.2-201ENST00000617795 2685 ntBASIC6.77□□□□□ -1.33
HMGA1P17096 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGA1P17096 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGA1P17096 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HMGA1P17096 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGA1P17096 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HMGA1P17096 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGA1P17096 IFIT1P1-201ENST00000400497 1449 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
HMGA1P17096 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 SAGE3P-201ENST00000619800 1635 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGA1P17096 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HMGA1P17096 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms