Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
FREM3P0C091 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FREM3P0C091 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.99□□□□□ -1.45
FREM3P0C091 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.99□□□□□ -1.45
FREM3P0C091 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
FREM3P0C091 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
FREM3P0C091 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FREM3P0C091 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
FREM3P0C091 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FREM3P0C091 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 UGT2B27P-201ENST00000505092 1620 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
FREM3P0C091 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FREM3P0C091 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FREM3P0C091 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FREM3P0C091 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.98□□□□□ -1.45
FREM3P0C091 PCNPP2-201ENST00000441651 455 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 AC234771.2-201ENST00000445718 597 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 AC117395.1-201ENST00000487390 403 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.98□□□□□ -1.45
FREM3P0C091 RN7SKP98-201ENST00000517070 156 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC009729.1-201ENST00000548873 1133 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC025283.1-201ENST00000572039 734 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC013488.1-201ENST00000526618 1838 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 RNA5SP232-201ENST00000364144 119 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.98□□□□□ -1.45
FREM3P0C091 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.98□□□□□ -1.45
FREM3P0C091 RN7SL170P-201ENST00000487098 295 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 AC021006.1-201ENST00000489849 553 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 HMGN1P16-201ENST00000508308 283 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.98□□□□□ -1.45
FREM3P0C091 RPL41P2-201ENST00000544920 409 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.98□□□□□ -1.45
FREM3P0C091 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.98□□□□□ -1.45
FREM3P0C091 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 AL359704.2-201ENST00000604335 521 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
FREM3P0C091 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 PSMC1P4-201ENST00000515236 1327 ntBASIC5.98□□□□□ -1.45
FREM3P0C091 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
FREM3P0C091 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
FREM3P0C091 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
FREM3P0C091 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FREM3P0C091 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FREM3P0C091 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
FREM3P0C091 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FREM3P0C091 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FREM3P0C091 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
FREM3P0C091 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
FREM3P0C091 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.97□□□□□ -1.45
FREM3P0C091 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.97□□□□□ -1.45
FREM3P0C091 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.97□□□□□ -1.45
FREM3P0C091 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.97□□□□□ -1.45
FREM3P0C091 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.97□□□□□ -1.45
FREM3P0C091 AC092718.4-201ENST00000566639 716 ntBASIC5.97□□□□□ -1.45
FREM3P0C091 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FREM3P0C091 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.97□□□□□ -1.45
FREM3P0C091 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.97□□□□□ -1.45
FREM3P0C091 SAGE3P-201ENST00000619800 1635 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms