Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL161454.1-201ENST00000446226 569 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC019080.2-201ENST00000453859 394 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 HSPE1P10-201ENST00000508631 558 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 NDUFB4P12-201ENST00000513465 390 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 RBMS2P1-201ENST00000525031 1226 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 SETP17-201ENST00000534163 817 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC068631.3-201ENST00000538831 225 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 AL109628.1-201ENST00000556877 366 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 MIR3663-201ENST00000583207 97 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 IGLJCOR18-201ENST00000584002 424 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 EIF4A2P1-201ENST00000587313 1063 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 COX6CP16-201ENST00000603667 216 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC108451.2-201ENST00000603875 538 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC130456.6-201ENST00000623745 765 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 FRG1DP-201ENST00000635586 771 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC074043.1-201ENST00000483126 1776 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 SGO1P2-201ENST00000429458 1589 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC091305.2-201ENST00000624049 1576 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC004074.1-201ENST00000421810 1063 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC097721.1-201ENST00000427150 1253 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 AL392003.1-201ENST00000434394 243 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC068135.1-201ENST00000446164 246 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 OR7E62P-201ENST00000456741 477 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 SNRPCP11-201ENST00000492453 205 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 RN7SKP5-201ENST00000517045 272 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC131935.1-201ENST00000524621 333 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC061975.3-201ENST00000583209 244 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 AP000907.4-201ENST00000604143 237 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALDH1A1P00352 HMGB1P51-201ENST00000605166 638 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 AC087045.1-201ENST00000605856 382 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 AL138478.1-201ENST00000612252 832 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 SAMMSON-209ENST00000641222 1100 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 LINC02128-205ENST00000641755 1334 ntBASIC8.95□□□□□ -0.98
ALDH1A1P00352 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.95□□□□□ -0.98
ALDH1A1P00352 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms