Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 CASC19-243ENST00000641588 1546 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 EFCAB10-205ENST00000486180 1550 ntAPPRIS P5 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 ADAM20P3-201ENST00000508710 2106 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC008537.3-201ENST00000623128 1881 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 HMGB1P5-201ENST00000255320 642 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 RNY4P24-201ENST00000362735 96 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 RN7SKP22-201ENST00000365097 293 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 EIF4A1P8-201ENST00000394444 1190 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 RN7SKP59-201ENST00000410520 314 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AL355863.1-201ENST00000424331 293 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 TRIM26BP-206ENST00000427723 753 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 TRMT112P4-201ENST00000429016 379 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AL133410.1-202ENST00000431981 472 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 VN1R54P-201ENST00000435210 1049 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 MTND2P24-201ENST00000453434 806 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL800P-201ENST00000484823 280 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AF305872.1-201ENST00000485217 471 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL215P-201ENST00000487718 298 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL700P-201ENST00000496982 294 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 BCAS2P1-201ENST00000528022 632 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 FDPSP4-201ENST00000534629 1049 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 TMIGD1-202ENST00000538566 1124 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC002375.1-201ENST00000551161 581 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AF067845.1-201ENST00000567210 1192 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AL390838.2-201ENST00000602394 274 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC010857.1-201ENST00000606398 594 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 RN7SKP290-201ENST00000606842 195 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC138932.5-201ENST00000617759 563 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 AC005840.5-201ENST00000619166 599 ntBASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
DEPDC4Q8N2C3 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.9□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms