Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.18□□□□□ -1.26
NEK3P51956 CR848007.2-201ENST00000424918 787 ntBASIC7.18□□□□□ -1.26
NEK3P51956 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.18□□□□□ -1.26
NEK3P51956 HMGN1P6-201ENST00000438508 291 ntBASIC7.18□□□□□ -1.26
NEK3P51956 MGAT2P1-201ENST00000449718 797 ntBASIC7.18□□□□□ -1.26
NEK3P51956 AL034399.1-201ENST00000451535 380 ntBASIC7.18□□□□□ -1.26
NEK3P51956 RPS16P9-201ENST00000477220 427 ntBASIC7.18□□□□□ -1.26
NEK3P51956 RPS14P8-201ENST00000478778 369 ntBASIC7.18□□□□□ -1.26
NEK3P51956 RN7SL849P-201ENST00000485236 295 ntBASIC7.18□□□□□ -1.26
NEK3P51956 AL079303.1-201ENST00000486611 463 ntBASIC7.18□□□□□ -1.26
NEK3P51956 RN7SL518P-201ENST00000491887 280 ntBASIC7.18□□□□□ -1.26
NEK3P51956 OR10J9P-201ENST00000511932 987 ntBASIC7.18□□□□□ -1.26
NEK3P51956 PGAM4P2-201ENST00000512491 721 ntBASIC7.18□□□□□ -1.26
NEK3P51956 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
NEK3P51956 RNU6-319P-201ENST00000516025 108 ntBASIC7.18□□□□□ -1.26
NEK3P51956 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.18□□□□□ -1.26
NEK3P51956 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.18□□□□□ -1.26
NEK3P51956 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.18□□□□□ -1.26
NEK3P51956 OR5M6P-201ENST00000530227 937 ntBASIC7.18□□□□□ -1.26
NEK3P51956 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 SSU72P6-201ENST00000532644 488 ntBASIC7.18□□□□□ -1.26
NEK3P51956 AC012414.2-201ENST00000559474 187 ntBASIC7.18□□□□□ -1.26
NEK3P51956 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.18□□□□□ -1.26
NEK3P51956 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.18□□□□□ -1.26
NEK3P51956 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
NEK3P51956 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.18□□□□□ -1.26
NEK3P51956 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.18□□□□□ -1.26
NEK3P51956 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.18□□□□□ -1.26
NEK3P51956 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.18□□□□□ -1.26
NEK3P51956 HPVC1-201ENST00000629899 1198 ntBASIC7.18□□□□□ -1.26
NEK3P51956 AL596275.2-208ENST00000641192 594 ntBASIC7.18□□□□□ -1.26
NEK3P51956 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.18□□□□□ -1.26
NEK3P51956 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NEK3P51956 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
NEK3P51956 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEK3P51956 CYP2G2P-201ENST00000594920 1485 ntBASIC7.17□□□□□ -1.26
NEK3P51956 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.17□□□□□ -1.26
NEK3P51956 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.17□□□□□ -1.26
NEK3P51956 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 RAB5CP1-201ENST00000395972 580 ntBASIC7.17□□□□□ -1.26
NEK3P51956 AL358178.1-201ENST00000407698 397 ntBASIC7.17□□□□□ -1.26
NEK3P51956 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.17□□□□□ -1.26
NEK3P51956 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.17□□□□□ -1.26
NEK3P51956 AC027124.1-201ENST00000440852 466 ntBASIC7.17□□□□□ -1.26
NEK3P51956 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 MORF4L1P4-201ENST00000450245 976 ntBASIC7.17□□□□□ -1.26
NEK3P51956 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.17□□□□□ -1.26
NEK3P51956 AC079193.1-201ENST00000460497 588 ntBASIC7.17□□□□□ -1.26
NEK3P51956 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 AC022336.1-201ENST00000475510 337 ntBASIC7.17□□□□□ -1.26
NEK3P51956 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 AL135933.1-201ENST00000498657 802 ntBASIC7.17□□□□□ -1.26
NEK3P51956 ABCA11P-202ENST00000504019 2110 ntBASIC7.17□□□□□ -1.26
NEK3P51956 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.17□□□□□ -1.26
NEK3P51956 GOLGA5P1-201ENST00000507317 980 ntBASIC7.17□□□□□ -1.26
NEK3P51956 COL6A4P2-205ENST00000509855 506 ntBASIC7.17□□□□□ -1.26
NEK3P51956 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC7.17□□□□□ -1.26
NEK3P51956 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 RNU6-760P-201ENST00000516078 97 ntBASIC7.17□□□□□ -1.26
NEK3P51956 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.17□□□□□ -1.26
NEK3P51956 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.17□□□□□ -1.26
NEK3P51956 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.17□□□□□ -1.26
NEK3P51956 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.17□□□□□ -1.26
NEK3P51956 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 WBP1LP11-201ENST00000586141 328 ntBASIC7.17□□□□□ -1.26
NEK3P51956 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 AL591222.2-201ENST00000604443 754 ntBASIC7.17□□□□□ -1.26
NEK3P51956 AL513218.1-201ENST00000606527 391 ntBASIC7.17□□□□□ -1.26
NEK3P51956 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 AC007671.1-201ENST00000616957 830 ntBASIC7.17□□□□□ -1.26
NEK3P51956 WBP1LP8-201ENST00000617401 327 ntBASIC7.17□□□□□ -1.26
NEK3P51956 AL162233.1-201ENST00000620014 944 ntBASIC7.17□□□□□ -1.26
NEK3P51956 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.17□□□□□ -1.26
NEK3P51956 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
NEK3P51956 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 OR52B5P-204ENST00000641744 3467 ntBASIC7.17□□□□□ -1.26
NEK3P51956 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 AC126474.2-201ENST00000623268 1750 ntBASIC7.17□□□□□ -1.26
NEK3P51956 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
NEK3P51956 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
NEK3P51956 AC090774.4-201ENST00000578888 1372 ntBASIC7.17□□□□□ -1.26
NEK3P51956 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.17□□□□□ -1.26
NEK3P51956 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEK3P51956 AL356361.1-201ENST00000400943 1459 ntBASIC7.17□□□□□ -1.26
NEK3P51956 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms