Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RNA5SP206-201ENST00000516703 121 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RNA5SP340-201ENST00000517132 107 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AC036111.2-201ENST00000533247 901 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 MIR6768-201ENST00000610734 72 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AC105114.1-201ENST00000624795 1862 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 LYARP1-201ENST00000436977 1501 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AF131215.2-201ENST00000531549 1710 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 OR7E25P-202ENST00000641088 5937 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 CUBNP3-201ENST00000457461 1784 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RNU1-46P-201ENST00000384425 164 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 DUTP4-201ENST00000424782 475 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RBMY2AP-201ENST00000445405 1157 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RBMY2CP-201ENST00000448575 1157 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RBMY2DP-202ENST00000448881 1157 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RBMY2BP-202ENST00000451071 1156 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 RPL12P30-201ENST00000488389 499 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AP001858.2-201ENST00000536213 601 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 MRPS21P8-201ENST00000569196 235 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AC073333.2-201ENST00000603589 769 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AP005431.1-201ENST00000618479 319 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 FO681491.1-202ENST00000623392 737 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 OR7E91P-202ENST00000642062 1198 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 AC122713.2-201ENST00000624942 3335 ntBASIC8.3□□□□□ -1.08
SCN11AQ9UI33 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCN11AQ9UI33 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 PPIAP7-201ENST00000454070 489 ntBASIC8.29□□□□□ -1.08
SCN11AQ9UI33 HLA-DPA3-207ENST00000454398 229 ntBASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AC021074.2-201ENST00000468434 172 ntBASIC8.29□□□□□ -1.08
SCN11AQ9UI33 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AC060775.1-201ENST00000518241 520 ntBASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AP000620.1-201ENST00000527147 504 ntBASIC8.29□□□□□ -1.08
SCN11AQ9UI33 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AC005332.4-201ENST00000592752 579 ntBASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AC129915.3-201ENST00000634128 948 ntBASIC8.29□□□□□ -1.08
SCN11AQ9UI33 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.29□□□□□ -1.08
SCN11AQ9UI33 AC007993.1-201ENST00000621298 2430 ntBASIC8.29□□□□□ -1.08
SCN11AQ9UI33 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 MAPK10-287ENST00000641217 3037 ntBASIC8.28□□□□□ -1.08
SCN11AQ9UI33 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AL023284.3-201ENST00000407767 334 ntBASIC8.28□□□□□ -1.08
SCN11AQ9UI33 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC002486.2-201ENST00000447806 590 ntBASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC011411.1-201ENST00000509592 876 ntBASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC015818.6-201ENST00000584274 634 ntBASIC8.28□□□□□ -1.08
SCN11AQ9UI33 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC005393.1-201ENST00000617916 584 ntBASIC8.28□□□□□ -1.08
SCN11AQ9UI33 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms