Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ELOCP34-201ENST00000604436 327 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AL390816.3-201ENST00000604527 1066 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AL589743.7-201ENST00000612637 233 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC007450.2-201ENST00000614160 290 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC090517.2-201ENST00000614966 680 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC011472.5-201ENST00000624079 508 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AL139254.2-202ENST00000641937 1156 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC010200.1-201ENST00000547380 1454 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AL135903.1-201ENST00000402742 1590 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC110998.1-201ENST00000519029 2053 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AP002833.3-201ENST00000625075 2265 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 MAPK10-281ENST00000641170 3070 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 SNORA4.1-201ENST00000364263 144 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 RNU6-259P-201ENST00000383999 107 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AL024509.1-201ENST00000397093 927 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC092745.2-202ENST00000411880 369 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 HMGN1P34-201ENST00000413023 290 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 USP9YP18-201ENST00000425912 695 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AP001324.1-201ENST00000428553 399 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 BX119917.1-201ENST00000432517 502 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC005588.1-201ENST00000439168 162 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AP000266.1-201ENST00000450936 582 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 DNAJC19P1-201ENST00000455312 319 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL35P-201ENST00000466169 292 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL318P-201ENST00000471955 297 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC079080.1-201ENST00000479841 822 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 OR4C2P-201ENST00000530855 1064 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 PGA4-202ENST00000537932 840 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 PGA3-204ENST00000538258 867 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC025423.3-201ENST00000541551 469 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 PGA3-207ENST00000543125 968 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 PGA4-206ENST00000544899 867 ntTSL 2 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AL022318.2-201ENST00000558766 258 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC091810.1-201ENST00000603131 325 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC119501.1-201ENST00000603646 475 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC091965.4-201ENST00000607691 587 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 CASC19-264ENST00000641912 1184 ntBASIC7.91□□□□□ -1.14
DEPDC4Q8N2C3 AP000705.2-201ENST00000433524 1386 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms