Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC016908.1-201ENST00000442571 1219 ntBASIC11.46□□□□□ -0.57
SMARCA4P51532 AC117395.1-201ENST00000487390 403 ntBASIC11.46□□□□□ -0.57
SMARCA4P51532 SSX8-201ENST00000506270 579 ntBASIC11.46□□□□□ -0.57
SMARCA4P51532 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
SMARCA4P51532 AC008429.4-201ENST00000521201 182 ntBASIC11.46□□□□□ -0.57
SMARCA4P51532 AC007225.2-201ENST00000562529 256 ntBASIC11.46□□□□□ -0.57
SMARCA4P51532 AL136228.1-201ENST00000622221 319 ntBASIC11.46□□□□□ -0.57
SMARCA4P51532 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC11.46□□□□□ -0.57
SMARCA4P51532 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC11.46□□□□□ -0.57
SMARCA4P51532 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 AC073065.1-201ENST00000411678 2866 ntBASIC11.46□□□□□ -0.57
SMARCA4P51532 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SMARCA4P51532 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SMARCA4P51532 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SMARCA4P51532 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SMARCA4P51532 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMARCA4P51532 USP40-202ENST00000409945 1946 ntTSL 2 BASIC11.46□□□□□ -0.58
SMARCA4P51532 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
SMARCA4P51532 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC11.46□□□□□ -0.58
SMARCA4P51532 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMARCA4P51532 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMARCA4P51532 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMARCA4P51532 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SMARCA4P51532 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SMARCA4P51532 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
SMARCA4P51532 RN7SL515P-201ENST00000463999 297 ntBASIC11.46□□□□□ -0.58
SMARCA4P51532 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC11.46□□□□□ -0.58
SMARCA4P51532 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMARCA4P51532 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC11.46□□□□□ -0.58
SMARCA4P51532 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC11.46□□□□□ -0.58
SMARCA4P51532 AC183089.2-201ENST00000637931 916 ntBASIC11.46□□□□□ -0.58
SMARCA4P51532 AC079776.5-201ENST00000641920 211 ntBASIC11.46□□□□□ -0.58
SMARCA4P51532 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SMARCA4P51532 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
SMARCA4P51532 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMARCA4P51532 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SMARCA4P51532 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMARCA4P51532 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
SMARCA4P51532 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SMARCA4P51532 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC11.45□□□□□ -0.58
SMARCA4P51532 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMARCA4P51532 MARK2P12-201ENST00000420129 585 ntBASIC11.45□□□□□ -0.58
SMARCA4P51532 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC11.45□□□□□ -0.58
SMARCA4P51532 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC11.45□□□□□ -0.58
SMARCA4P51532 LECT2-205ENST00000522943 574 ntTSL 3 BASIC11.45□□□□□ -0.58
SMARCA4P51532 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SMARCA4P51532 AC025171.4-201ENST00000607250 1047 ntBASIC11.45□□□□□ -0.58
SMARCA4P51532 AL021707.7-201ENST00000607991 416 ntBASIC11.45□□□□□ -0.58
SMARCA4P51532 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC11.45□□□□□ -0.58
SMARCA4P51532 AC123769.1-201ENST00000530992 3192 ntBASIC11.45□□□□□ -0.58
SMARCA4P51532 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMARCA4P51532 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC11.45□□□□□ -0.58
SMARCA4P51532 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SMARCA4P51532 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SMARCA4P51532 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SMARCA4P51532 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SMARCA4P51532 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SMARCA4P51532 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMARCA4P51532 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMARCA4P51532 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC11.44□□□□□ -0.58
SMARCA4P51532 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SMARCA4P51532 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SMARCA4P51532 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMARCA4P51532 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC11.44□□□□□ -0.58
SMARCA4P51532 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC11.44□□□□□ -0.58
SMARCA4P51532 STARD6-202ENST00000577499 696 ntTSL 2 BASIC11.44□□□□□ -0.58
SMARCA4P51532 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMARCA4P51532 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC11.44□□□□□ -0.58
SMARCA4P51532 AL049767.1-202ENST00000637826 242 ntBASIC11.44□□□□□ -0.58
SMARCA4P51532 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMARCA4P51532 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SMARCA4P51532 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMARCA4P51532 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC11.44□□□□□ -0.58
SMARCA4P51532 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMARCA4P51532 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC11.43□□□□□ -0.58
SMARCA4P51532 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 GTF3AP1-201ENST00000416942 1004 ntBASIC11.43□□□□□ -0.58
SMARCA4P51532 RN7SL705P-201ENST00000481678 294 ntBASIC11.43□□□□□ -0.58
SMARCA4P51532 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC11.43□□□□□ -0.58
SMARCA4P51532 SNORD95-201ENST00000579879 68 ntBASIC11.43□□□□□ -0.58
SMARCA4P51532 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC11.43□□□□□ -0.58
SMARCA4P51532 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 RBMY1HP-201ENST00000382759 1389 ntBASIC11.43□□□□□ -0.58
SMARCA4P51532 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SMARCA4P51532 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SMARCA4P51532 AC008555.1-201ENST00000561778 2757 ntBASIC11.43□□□□□ -0.58
SMARCA4P51532 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms