Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.72□□□□□ -1.17
COL4A5P29400 DNAJC19P5-201ENST00000443295 316 ntBASIC7.72□□□□□ -1.17
COL4A5P29400 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.72□□□□□ -1.17
COL4A5P29400 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.72□□□□□ -1.17
COL4A5P29400 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.72□□□□□ -1.17
COL4A5P29400 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.72□□□□□ -1.17
COL4A5P29400 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.72□□□□□ -1.17
COL4A5P29400 PTTG3P-201ENST00000521862 606 ntBASIC7.72□□□□□ -1.17
COL4A5P29400 AC130365.2-201ENST00000525882 1201 ntBASIC7.72□□□□□ -1.17
COL4A5P29400 AC233702.7-202ENST00000582941 211 ntBASIC7.72□□□□□ -1.17
COL4A5P29400 AC079776.5-201ENST00000641920 211 ntBASIC7.72□□□□□ -1.17
COL4A5P29400 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL4A5P29400 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.72□□□□□ -1.17
COL4A5P29400 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
COL4A5P29400 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC7.72□□□□□ -1.17
COL4A5P29400 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
COL4A5P29400 OR13C1P-202ENST00000641378 2919 ntBASIC7.71□□□□□ -1.17
COL4A5P29400 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL4A5P29400 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
COL4A5P29400 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL4A5P29400 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL4A5P29400 AC027279.1-201ENST00000568885 4284 ntBASIC7.71□□□□□ -1.17
COL4A5P29400 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL4A5P29400 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL4A5P29400 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL4A5P29400 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL4A5P29400 AL157884.1-201ENST00000424561 454 ntBASIC7.71□□□□□ -1.18
COL4A5P29400 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.71□□□□□ -1.18
COL4A5P29400 SUMO2P1-206ENST00000445436 284 ntBASIC7.71□□□□□ -1.18
COL4A5P29400 HIGD1AP16-201ENST00000450986 258 ntBASIC7.71□□□□□ -1.18
COL4A5P29400 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.71□□□□□ -1.18
COL4A5P29400 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.71□□□□□ -1.18
COL4A5P29400 AL021707.7-201ENST00000607991 416 ntBASIC7.71□□□□□ -1.18
COL4A5P29400 AC010333.3-201ENST00000615100 402 ntBASIC7.71□□□□□ -1.18
COL4A5P29400 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL4A5P29400 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL4A5P29400 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL4A5P29400 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
COL4A5P29400 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
COL4A5P29400 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.71□□□□□ -1.18
COL4A5P29400 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC7.71□□□□□ -1.18
COL4A5P29400 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
COL4A5P29400 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL4A5P29400 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
COL4A5P29400 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
COL4A5P29400 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
COL4A5P29400 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL4A5P29400 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.71□□□□□ -1.18
COL4A5P29400 NEK2P2-201ENST00000438441 1338 ntBASIC7.71□□□□□ -1.18
COL4A5P29400 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL4A5P29400 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL4A5P29400 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.7□□□□□ -1.18
COL4A5P29400 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL4A5P29400 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL4A5P29400 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL4A5P29400 U3.43-201ENST00000410734 213 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.7□□□□□ -1.18
COL4A5P29400 AL355355.1-201ENST00000442900 793 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 DEFA11P-201ENST00000446470 261 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.7□□□□□ -1.18
COL4A5P29400 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.7□□□□□ -1.18
COL4A5P29400 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL4A5P29400 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.7□□□□□ -1.18
COL4A5P29400 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.7□□□□□ -1.18
COL4A5P29400 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 AC183089.2-201ENST00000637931 916 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 AC009237.3-203ENST00000442128 3551 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 AC023818.2-201ENST00000623817 2304 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 AL590065.1-201ENST00000603371 4774 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.7□□□□□ -1.18
COL4A5P29400 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL4A5P29400 MIR199B-201ENST00000384849 110 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL4A5P29400 MIR1203-201ENST00000408812 85 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.7□□□□□ -1.18
COL4A5P29400 BX323845.3-201ENST00000428215 527 ntBASIC7.7□□□□□ -1.18
COL4A5P29400 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.7□□□□□ -1.18
COL4A5P29400 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.7□□□□□ -1.18
COL4A5P29400 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.7□□□□□ -1.18
COL4A5P29400 AC008429.4-201ENST00000521201 182 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms