Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.92□□□□□ -1.3
RETP07949 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.92□□□□□ -1.3
RETP07949 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.92□□□□□ -1.3
RETP07949 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RETP07949 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.92□□□□□ -1.3
RETP07949 SETP17-201ENST00000534163 817 ntBASIC6.92□□□□□ -1.3
RETP07949 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.92□□□□□ -1.3
RETP07949 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.92□□□□□ -1.3
RETP07949 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.92□□□□□ -1.3
RETP07949 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.92□□□□□ -1.3
RETP07949 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.92□□□□□ -1.3
RETP07949 AL365181.4-201ENST00000609800 547 ntBASIC6.92□□□□□ -1.3
RETP07949 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
RETP07949 uc_338.31-201ENST00000615595 186 ntBASIC6.92□□□□□ -1.3
RETP07949 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RETP07949 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.92□□□□□ -1.3
RETP07949 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RETP07949 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RETP07949 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
RETP07949 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
RETP07949 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RETP07949 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
RETP07949 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
RETP07949 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RETP07949 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RETP07949 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.92□□□□□ -1.3
RETP07949 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RETP07949 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.91□□□□□ -1.3
RETP07949 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RETP07949 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.91□□□□□ -1.3
RETP07949 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
RETP07949 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 RNA5SP512-201ENST00000364550 120 ntBASIC6.91□□□□□ -1.3
RETP07949 RN7SKP78-201ENST00000364711 318 ntBASIC6.91□□□□□ -1.3
RETP07949 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.91□□□□□ -1.3
RETP07949 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
RETP07949 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 RN7SKP129-201ENST00000410288 299 ntBASIC6.91□□□□□ -1.3
RETP07949 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.91□□□□□ -1.3
RETP07949 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.91□□□□□ -1.3
RETP07949 CYP4F32P-201ENST00000426492 504 ntBASIC6.91□□□□□ -1.3
RETP07949 AC069154.1-201ENST00000432914 542 ntBASIC6.91□□□□□ -1.3
RETP07949 PSPC1P2-201ENST00000455130 225 ntBASIC6.91□□□□□ -1.3
RETP07949 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.91□□□□□ -1.3
RETP07949 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 AC117500.1-201ENST00000497352 755 ntBASIC6.91□□□□□ -1.3
RETP07949 AC120036.3-201ENST00000517826 292 ntBASIC6.91□□□□□ -1.3
RETP07949 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.91□□□□□ -1.3
RETP07949 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.91□□□□□ -1.3
RETP07949 IGKV3D-34-201ENST00000522638 302 ntBASIC6.91□□□□□ -1.3
RETP07949 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.91□□□□□ -1.3
RETP07949 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.91□□□□□ -1.3
RETP07949 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.91□□□□□ -1.3
RETP07949 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.91□□□□□ -1.3
RETP07949 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.91□□□□□ -1.3
RETP07949 RPL29P33-201ENST00000587474 316 ntBASIC6.91□□□□□ -1.3
RETP07949 AC063977.7-201ENST00000594454 337 ntBASIC6.91□□□□□ -1.3
RETP07949 AC027243.2-201ENST00000602530 724 ntBASIC6.91□□□□□ -1.3
RETP07949 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.91□□□□□ -1.3
RETP07949 AC079414.3-201ENST00000612986 1090 ntBASIC6.91□□□□□ -1.3
RETP07949 AC020763.5-201ENST00000623298 430 ntBASIC6.91□□□□□ -1.3
RETP07949 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.91□□□□□ -1.3
RETP07949 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.91□□□□□ -1.3
RETP07949 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
RETP07949 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.91□□□□□ -1.3
RETP07949 AC022819.1-201ENST00000563495 3910 ntBASIC6.91□□□□□ -1.3
RETP07949 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.91□□□□□ -1.3
RETP07949 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RETP07949 CDY19P-201ENST00000411668 1613 ntBASIC6.9□□□□□ -1.3
RETP07949 CDY18P-201ENST00000438294 1609 ntBASIC6.9□□□□□ -1.3
RETP07949 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.9□□□□□ -1.3
RETP07949 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RETP07949 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.9□□□□□ -1.3
RETP07949 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.9□□□□□ -1.3
RETP07949 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RETP07949 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.9□□□□□ -1.3
RETP07949 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RETP07949 RNU1-55P-201ENST00000365510 158 ntBASIC6.9□□□□□ -1.3
RETP07949 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.9□□□□□ -1.3
RETP07949 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RETP07949 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RETP07949 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
RETP07949 GEMIN2P2-201ENST00000418195 715 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms