Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 PSMC1P2-201ENST00000423961 1204 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 RNA5SP473-201ENST00000516402 125 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 AC063977.7-201ENST00000594454 337 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 AC005520.3-201ENST00000602874 370 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 AL021368.1-201ENST00000607490 540 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 AC079414.3-201ENST00000612986 1090 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 MIR6806-201ENST00000622141 64 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 CASC19-212ENST00000641153 1287 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 AC079949.2-201ENST00000617117 2933 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 AC010168.2-201ENST00000562691 5428 ntBASIC7.89□□□□□ -1.15
HLA-DOAP06340 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
HLA-DOAP06340 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
HLA-DOAP06340 OR6M2P-202ENST00000641780 2063 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 CAP1P2-201ENST00000417455 1409 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 RNA5SP232-201ENST00000364144 119 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 MRPS6P2-201ENST00000381143 370 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 RAB5CP1-201ENST00000395972 580 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 PSMA6P1-201ENST00000400275 741 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 VN1R12P-201ENST00000403778 876 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 MTND2P11-201ENST00000423638 648 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 ZNF736P1Y-201ENST00000440402 1276 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 AL020997.1-201ENST00000446554 349 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 AC118758.1-202ENST00000454719 225 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AC122718.2-201ENST00000505325 591 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AP003115.1-201ENST00000569849 463 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 MIR3154-201ENST00000577829 84 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AP000720.1-201ENST00000625091 483 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 BRAFP1-201ENST00000445336 2703 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AP005139.1-201ENST00000580702 1647 ntBASIC7.88□□□□□ -1.15
HLA-DOAP06340 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.88□□□□□ -1.15
HLA-DOAP06340 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-DOAP06340 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-DOAP06340 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-DOAP06340 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AF131215.2-201ENST00000531549 1710 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-DOAP06340 RN7SKP86-201ENST00000410454 332 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC245452.2-201ENST00000435222 392 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 ARMC4P1-201ENST00000438905 707 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-DOAP06340 TVP23CP1-201ENST00000450317 639 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 SULT1D1P-201ENST00000458020 882 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms