Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC010998.3-201ENST00000613871 631 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 CASC19-274ENST00000642018 970 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 RN7SKP275-201ENST00000364626 301 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 MIR541-201ENST00000401360 84 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC002486.2-201ENST00000447806 590 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC093166.3-201ENST00000448785 303 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 RN7SL561P-201ENST00000488553 281 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 RPL12P7-201ENST00000493832 494 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 PFN1P8-201ENST00000497012 543 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 IGLV3-6-201ENST00000523937 250 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AC084121.1-201ENST00000533882 835 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 LINC02495-203ENST00000636704 242 ntBASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP2Q96SN8 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC104964.2-201ENST00000562242 4641 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 RBBP4P5-201ENST00000398583 1266 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC068228.1-201ENST00000461723 211 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC021074.2-201ENST00000468434 172 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 RN7SKP35-201ENST00000517210 151 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 MIR6811-201ENST00000620409 58 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC024884.1-201ENST00000620583 399 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 MAPK10-287ENST00000641217 3037 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 QRSL1P1-201ENST00000400977 1540 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 AC005332.9-201ENST00000620266 2921 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 CASC19-246ENST00000641625 1606 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 CASC19-228ENST00000641414 1684 ntBASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP2Q96SN8 TATDN2P3-201ENST00000452855 3665 ntBASIC7.66□□□□□ -1.18
CDK5RAP2Q96SN8 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP2Q96SN8 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP2Q96SN8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
CDK5RAP2Q96SN8 PSMA6P1-201ENST00000400275 741 ntBASIC7.66□□□□□ -1.18
CDK5RAP2Q96SN8 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP2Q96SN8 PMS2P9-201ENST00000441237 515 ntBASIC7.66□□□□□ -1.18
CDK5RAP2Q96SN8 OR52I1-201ENST00000450052 1050 ntBASIC7.66□□□□□ -1.18
CDK5RAP2Q96SN8 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms