Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RN7SL714P-201ENST00000487050 298 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 AC083906.1-201ENST00000509298 406 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 AC233702.7-202ENST00000582941 211 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 AC005332.4-201ENST00000592752 579 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 PFKM-232ENST00000629846 381 ntTSL 4 BASIC11.5□□□□□ -0.57
SMARCA4P51532 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMARCA4P51532 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC11.5□□□□□ -0.57
SMARCA4P51532 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMARCA4P51532 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
SMARCA4P51532 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SMARCA4P51532 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMARCA4P51532 IL24-207ENST00000611909 1621 ntTSL 3 BASIC11.5□□□□□ -0.57
SMARCA4P51532 SHQ1P1-201ENST00000437111 1544 ntBASIC11.5□□□□□ -0.57
SMARCA4P51532 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMARCA4P51532 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMARCA4P51532 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC11.5□□□□□ -0.57
SMARCA4P51532 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMARCA4P51532 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SMARCA4P51532 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SMARCA4P51532 SNORA58B-201ENST00000364259 136 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC11.49□□□□□ -0.57
SMARCA4P51532 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC11.49□□□□□ -0.57
SMARCA4P51532 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC11.49□□□□□ -0.57
SMARCA4P51532 GAPDHP75-201ENST00000433910 943 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 SUMO2P3-201ENST00000438311 288 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 RPL34P33-201ENST00000486062 334 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC11.49□□□□□ -0.57
SMARCA4P51532 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC11.49□□□□□ -0.57
SMARCA4P51532 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC11.49□□□□□ -0.57
SMARCA4P51532 AC135626.1-201ENST00000556983 435 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 AC004477.3-201ENST00000614061 590 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMARCA4P51532 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC11.49□□□□□ -0.57
SMARCA4P51532 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC11.49□□□□□ -0.57
SMARCA4P51532 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMARCA4P51532 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMARCA4P51532 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMARCA4P51532 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMARCA4P51532 AP005139.1-201ENST00000580702 1647 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
SMARCA4P51532 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMARCA4P51532 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
SMARCA4P51532 SNORA21-201ENST00000362423 132 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC11.49□□□□□ -0.57
SMARCA4P51532 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SMARCA4P51532 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC11.49□□□□□ -0.57
SMARCA4P51532 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC11.49□□□□□ -0.57
SMARCA4P51532 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC11.49□□□□□ -0.57
SMARCA4P51532 AP003396.4-201ENST00000527574 265 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 AC073488.3-201ENST00000631611 778 ntBASIC11.49□□□□□ -0.57
SMARCA4P51532 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMARCA4P51532 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
SMARCA4P51532 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC11.49□□□□□ -0.57
SMARCA4P51532 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMARCA4P51532 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SMARCA4P51532 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC11.48□□□□□ -0.57
SMARCA4P51532 AC015689.2-201ENST00000528172 1738 ntBASIC11.48□□□□□ -0.57
SMARCA4P51532 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC11.48□□□□□ -0.57
SMARCA4P51532 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMARCA4P51532 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SMARCA4P51532 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC11.48□□□□□ -0.57
SMARCA4P51532 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC11.48□□□□□ -0.57
SMARCA4P51532 MIR1204-201ENST00000408388 67 ntBASIC11.48□□□□□ -0.57
SMARCA4P51532 DNAJC19P5-201ENST00000443295 316 ntBASIC11.48□□□□□ -0.57
SMARCA4P51532 RPSAP39-201ENST00000467439 883 ntBASIC11.48□□□□□ -0.57
SMARCA4P51532 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC11.48□□□□□ -0.57
SMARCA4P51532 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC11.48□□□□□ -0.57
SMARCA4P51532 AC016180.1-201ENST00000567945 403 ntBASIC11.48□□□□□ -0.57
SMARCA4P51532 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC11.48□□□□□ -0.57
SMARCA4P51532 AC239803.2-201ENST00000610161 430 ntBASIC11.48□□□□□ -0.57
SMARCA4P51532 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC11.48□□□□□ -0.57
SMARCA4P51532 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMARCA4P51532 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMARCA4P51532 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
SMARCA4P51532 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMARCA4P51532 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC11.47□□□□□ -0.57
SMARCA4P51532 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC11.47□□□□□ -0.57
SMARCA4P51532 MIR1178-201ENST00000408396 91 ntBASIC11.47□□□□□ -0.57
SMARCA4P51532 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC11.47□□□□□ -0.57
SMARCA4P51532 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC11.47□□□□□ -0.57
SMARCA4P51532 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC11.47□□□□□ -0.57
SMARCA4P51532 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC11.47□□□□□ -0.57
SMARCA4P51532 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 MELK-207ENST00000536860 2342 ntTSL 2 BASIC11.47□□□□□ -0.57
SMARCA4P51532 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMARCA4P51532 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMARCA4P51532 U3.43-201ENST00000410734 213 ntBASIC11.46□□□□□ -0.57
SMARCA4P51532 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC11.46□□□□□ -0.57
SMARCA4P51532 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms