Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.23□□□□□ -1.25
RB1P06400 AL445383.1-201ENST00000554689 874 ntBASIC7.23□□□□□ -1.25
RB1P06400 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.23□□□□□ -1.25
RB1P06400 SYPL1P2-201ENST00000582878 727 ntBASIC7.23□□□□□ -1.25
RB1P06400 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.23□□□□□ -1.25
RB1P06400 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.23□□□□□ -1.25
RB1P06400 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.23□□□□□ -1.25
RB1P06400 MIR6862-1-201ENST00000613016 70 ntBASIC7.23□□□□□ -1.25
RB1P06400 MIR6862-2-201ENST00000614755 70 ntBASIC7.23□□□□□ -1.25
RB1P06400 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RB1P06400 PSMC1P4-201ENST00000515236 1327 ntBASIC7.23□□□□□ -1.25
RB1P06400 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.22□□□□□ -1.25
RB1P06400 AL451064.2-201ENST00000623514 1654 ntBASIC7.22□□□□□ -1.25
RB1P06400 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
RB1P06400 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 AF131215.2-201ENST00000531549 1710 ntBASIC7.22□□□□□ -1.25
RB1P06400 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.22□□□□□ -1.25
RB1P06400 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RB1P06400 YWHAZP4-201ENST00000392459 708 ntBASIC7.22□□□□□ -1.25
RB1P06400 CYCSP17-201ENST00000407870 315 ntBASIC7.22□□□□□ -1.25
RB1P06400 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.22□□□□□ -1.25
RB1P06400 RN7SL39P-201ENST00000462264 297 ntBASIC7.22□□□□□ -1.25
RB1P06400 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.22□□□□□ -1.25
RB1P06400 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 RNA5SP441-201ENST00000516809 88 ntBASIC7.22□□□□□ -1.25
RB1P06400 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.22□□□□□ -1.25
RB1P06400 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.22□□□□□ -1.25
RB1P06400 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.22□□□□□ -1.25
RB1P06400 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC7.22□□□□□ -1.25
RB1P06400 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.22□□□□□ -1.25
RB1P06400 AC026956.1-201ENST00000558741 396 ntBASIC7.22□□□□□ -1.25
RB1P06400 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 AL365181.4-201ENST00000609800 547 ntBASIC7.22□□□□□ -1.25
RB1P06400 AL135999.3-201ENST00000610501 812 ntBASIC7.22□□□□□ -1.25
RB1P06400 AL136097.3-201ENST00000611097 505 ntBASIC7.22□□□□□ -1.25
RB1P06400 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 AL512356.3-201ENST00000623005 461 ntBASIC7.22□□□□□ -1.25
RB1P06400 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.22□□□□□ -1.25
RB1P06400 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
RB1P06400 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 AC020658.2-201ENST00000559030 4020 ntBASIC7.22□□□□□ -1.25
RB1P06400 Z99129.4-201ENST00000624649 2435 ntBASIC7.22□□□□□ -1.25
RB1P06400 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.22□□□□□ -1.25
RB1P06400 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RB1P06400 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
RB1P06400 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RB1P06400 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RB1P06400 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
RB1P06400 AC012213.2-201ENST00000562917 4597 ntBASIC7.21□□□□□ -1.25
RB1P06400 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RB1P06400 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.21□□□□□ -1.25
RB1P06400 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.21□□□□□ -1.26
RB1P06400 RN7SKP77-201ENST00000363261 353 ntBASIC7.21□□□□□ -1.26
RB1P06400 RNA5SP77-201ENST00000365394 120 ntBASIC7.21□□□□□ -1.26
RB1P06400 MRPS6P2-201ENST00000381143 370 ntBASIC7.21□□□□□ -1.26
RB1P06400 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.21□□□□□ -1.26
RB1P06400 AC108479.1-201ENST00000431142 427 ntBASIC7.21□□□□□ -1.26
RB1P06400 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 RN7SL569P-201ENST00000494652 288 ntBASIC7.21□□□□□ -1.26
RB1P06400 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.21□□□□□ -1.26
RB1P06400 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.21□□□□□ -1.26
RB1P06400 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.21□□□□□ -1.26
RB1P06400 RPL3P13-201ENST00000550415 216 ntBASIC7.21□□□□□ -1.26
RB1P06400 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.21□□□□□ -1.26
RB1P06400 AC092718.4-201ENST00000566639 716 ntBASIC7.21□□□□□ -1.26
RB1P06400 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.21□□□□□ -1.26
RB1P06400 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.21□□□□□ -1.26
RB1P06400 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.21□□□□□ -1.26
RB1P06400 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.21□□□□□ -1.26
RB1P06400 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.21□□□□□ -1.26
RB1P06400 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.21□□□□□ -1.26
RB1P06400 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
RB1P06400 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.21□□□□□ -1.26
RB1P06400 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms