Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC9□□□□□ -0.97
ALDH1A1P00352 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC9□□□□□ -0.97
ALDH1A1P00352 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 SNORA7B-201ENST00000384360 139 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC9□□□□□ -0.97
ALDH1A1P00352 AL662791.3-201ENST00000413771 776 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 NPM1P4-201ENST00000414095 812 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 MTND4P3-201ENST00000417829 541 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 RPS27AP7-201ENST00000422792 455 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC9□□□□□ -0.97
ALDH1A1P00352 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC9□□□□□ -0.97
ALDH1A1P00352 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 AC023271.1-201ENST00000445936 1090 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC9□□□□□ -0.97
ALDH1A1P00352 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC9□□□□□ -0.97
ALDH1A1P00352 RPL5P32-201ENST00000454085 879 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC9□□□□□ -0.97
ALDH1A1P00352 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC9□□□□□ -0.97
ALDH1A1P00352 AC091965.2-201ENST00000512324 613 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 OR5AM1P-201ENST00000532136 1032 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 PDCL3P1-201ENST00000534575 734 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC9□□□□□ -0.97
ALDH1A1P00352 ELOCP32-201ENST00000548625 324 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC9□□□□□ -0.97
ALDH1A1P00352 VN1R82P-201ENST00000601481 356 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 Z99129.1-201ENST00000612510 255 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 AL161931.1-201ENST00000612768 246 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC9□□□□□ -0.97
ALDH1A1P00352 AL590004.4-201ENST00000566733 7060 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 MFSD8-256ENST00000641949 1640 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC9□□□□□ -0.97
ALDH1A1P00352 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALDH1A1P00352 SLC16A1P1-201ENST00000486743 1510 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 DDX50P1-201ENST00000438163 2400 ntBASIC9□□□□□ -0.97
ALDH1A1P00352 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC9□□□□□ -0.97
ALDH1A1P00352 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 AC013444.1-201ENST00000428909 1904 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 SNORA11.3-201ENST00000408471 128 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 RN7SKP127-201ENST00000410443 354 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 PGBD4P8-201ENST00000412993 562 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 MTATP6P27-201ENST00000416987 621 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 AC127537.1-201ENST00000418183 748 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 AL022324.2-201ENST00000434827 780 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 UBE2V1P8-201ENST00000437166 265 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 FGF7P5-201ENST00000441829 291 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 AL020997.1-201ENST00000446554 349 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 RN7SL861P-201ENST00000473793 285 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 LINC00888-204ENST00000487386 421 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ALDH1A1P00352 RPL4P1-201ENST00000496596 1278 ntBASIC8.99□□□□□ -0.97
ALDH1A1P00352 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALDH1A1P00352 TMEM97P2-201ENST00000517841 403 ntBASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms