Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
LHX1P48742 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
LHX1P48742 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
LHX1P48742 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
LHX1P48742 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.1□□□□□ -1.27
LHX1P48742 RANP6-201ENST00000413691 644 ntBASIC7.1□□□□□ -1.27
LHX1P48742 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 FAM183DP-201ENST00000421987 399 ntBASIC7.1□□□□□ -1.27
LHX1P48742 AC128677.1-201ENST00000436016 442 ntBASIC7.1□□□□□ -1.27
LHX1P48742 GAPDHP33-201ENST00000443168 1013 ntBASIC7.1□□□□□ -1.27
LHX1P48742 GAPDHP16-201ENST00000448152 962 ntBASIC7.1□□□□□ -1.27
LHX1P48742 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX1P48742 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX1P48742 RN7SL836P-201ENST00000476140 296 ntBASIC7.1□□□□□ -1.27
LHX1P48742 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX1P48742 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
LHX1P48742 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX1P48742 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX1P48742 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX1P48742 AC138517.1-201ENST00000515724 568 ntBASIC7.1□□□□□ -1.27
LHX1P48742 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX1P48742 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX1P48742 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 AP003115.1-201ENST00000569849 463 ntBASIC7.1□□□□□ -1.27
LHX1P48742 AC011921.2-201ENST00000589465 152 ntBASIC7.1□□□□□ -1.27
LHX1P48742 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.1□□□□□ -1.27
LHX1P48742 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 AC093635.1-201ENST00000609028 555 ntBASIC7.1□□□□□ -1.27
LHX1P48742 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX1P48742 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.1□□□□□ -1.27
LHX1P48742 AC122713.2-201ENST00000624942 3335 ntBASIC7.1□□□□□ -1.27
LHX1P48742 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX1P48742 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX1P48742 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.1□□□□□ -1.27
LHX1P48742 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX1P48742 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX1P48742 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LHX1P48742 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX1P48742 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX1P48742 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LHX1P48742 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.09□□□□□ -1.27
LHX1P48742 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.09□□□□□ -1.27
LHX1P48742 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
LHX1P48742 VIM2P-201ENST00000402383 1294 ntBASIC7.09□□□□□ -1.27
LHX1P48742 RPL12P23-201ENST00000405880 490 ntBASIC7.09□□□□□ -1.27
LHX1P48742 AL049697.3-201ENST00000406493 982 ntBASIC7.09□□□□□ -1.27
LHX1P48742 COL11A2P1-205ENST00000441798 676 ntBASIC7.09□□□□□ -1.27
LHX1P48742 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.09□□□□□ -1.27
LHX1P48742 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.09□□□□□ -1.27
LHX1P48742 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.09□□□□□ -1.27
LHX1P48742 TVP23CP1-201ENST00000450317 639 ntBASIC7.09□□□□□ -1.27
LHX1P48742 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.09□□□□□ -1.27
LHX1P48742 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.09□□□□□ -1.27
LHX1P48742 BTG1P1-201ENST00000540396 508 ntBASIC7.09□□□□□ -1.27
LHX1P48742 AC015819.1-201ENST00000613588 663 ntBASIC7.09□□□□□ -1.27
LHX1P48742 AC004241.2-201ENST00000614562 444 ntBASIC7.09□□□□□ -1.27
LHX1P48742 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX1P48742 AC010401.2-201ENST00000575137 4934 ntBASIC7.09□□□□□ -1.27
LHX1P48742 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LHX1P48742 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.09□□□□□ -1.27
LHX1P48742 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.09□□□□□ -1.27
LHX1P48742 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
LHX1P48742 AC007012.2-201ENST00000623206 1676 ntBASIC7.09□□□□□ -1.27
LHX1P48742 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.09□□□□□ -1.27
LHX1P48742 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
LHX1P48742 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
LHX1P48742 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 AL031123.3-201ENST00000623345 1837 ntBASIC7.08□□□□□ -1.28
LHX1P48742 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
LHX1P48742 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX1P48742 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LHX1P48742 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX1P48742 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 OR7A2P-201ENST00000304105 930 ntBASIC7.08□□□□□ -1.28
LHX1P48742 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 RNA5SP85-201ENST00000365378 119 ntBASIC7.08□□□□□ -1.28
LHX1P48742 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LHX1P48742 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 RN7SKP146-201ENST00000410242 334 ntBASIC7.08□□□□□ -1.28
LHX1P48742 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.08□□□□□ -1.28
LHX1P48742 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX1P48742 AL645939.3-201ENST00000435408 225 ntBASIC7.08□□□□□ -1.28
LHX1P48742 AC092106.2-201ENST00000436597 487 ntBASIC7.08□□□□□ -1.28
LHX1P48742 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
LHX1P48742 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX1P48742 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.08□□□□□ -1.28
LHX1P48742 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX1P48742 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX1P48742 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX1P48742 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms