Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 RN7SKP296-201ENST00000411185 341 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 GAPDHP34-201ENST00000432112 823 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 GAPDHP33-201ENST00000443168 1013 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC093664.1-201ENST00000511779 289 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC011352.2-201ENST00000514574 1016 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 SNORD96A-201ENST00000606577 79 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC093635.1-201ENST00000609028 555 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 AC012676.3-201ENST00000614983 479 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 uc_338.29-201ENST00000615099 168 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.93□□□□□ -1.14
HLA-DOAP06340 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-DOAP06340 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-DOAP06340 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 RACGAP1P-201ENST00000550663 1879 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 AL929472.1-201ENST00000417484 429 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 OR6C71P-201ENST00000432580 913 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 DNAJA1P6-201ENST00000437347 354 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 TIMM8BP2-201ENST00000445940 251 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC093816.1-201ENST00000515076 913 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 SNORA48.9-201ENST00000516419 162 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 AL591767.3-201ENST00000554632 525 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC092718.4-201ENST00000566639 716 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 SNORA70D-201ENST00000578836 135 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC245052.7-201ENST00000601161 359 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 AL589743.6-201ENST00000611025 117 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 MIR7109-201ENST00000613748 65 ntBASIC7.92□□□□□ -1.14
HLA-DOAP06340 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.92□□□□□ -1.14
HLA-DOAP06340 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HLA-DOAP06340 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AC015871.3-201ENST00000618835 2261 ntBASIC7.91□□□□□ -1.14
HLA-DOAP06340 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HLA-DOAP06340 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.91□□□□□ -1.14
HLA-DOAP06340 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms