Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 RNFT1P3-201ENST00000340898 1052 ntBASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 AC064862.4-201ENST00000442180 334 ntBASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 AP006222.1-205ENST00000450734 457 ntBASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 AL445665.1-202ENST00000452436 324 ntBASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
COL22A1Q8NFW1 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 RNA5SP500-201ENST00000364486 119 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AP000648.1-201ENST00000529682 397 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AL157899.1-201ENST00000604110 936 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AL031601.1-201ENST00000605702 394 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 MIR6809-201ENST00000612189 116 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AC026951.2-201ENST00000613847 241 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 MIR6730-201ENST00000622213 67 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AC073488.2-201ENST00000631903 751 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AC016582.1-202ENST00000636341 2982 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 AC061975.7-201ENST00000592016 2692 ntBASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
COL22A1Q8NFW1 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 OR3A2-201ENST00000408891 1076 ntBASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 AL513325.1-201ENST00000417716 1034 ntBASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 ACA64.1-201ENST00000459171 127 ntBASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 SUMO2P15-201ENST00000604285 278 ntBASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 AC091768.1-201ENST00000609258 930 ntBASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 RFPL4AP6-201ENST00000616792 846 ntBASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 FTX-215ENST00000638681 9771 ntTSL 5 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 AP002833.3-201ENST00000625075 2265 ntBASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL22A1Q8NFW1 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
COL22A1Q8NFW1 USP40-202ENST00000409945 1946 ntTSL 2 BASIC8.65□□□□□ -1.03
COL22A1Q8NFW1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.65□□□□□ -1.03
COL22A1Q8NFW1 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
COL22A1Q8NFW1 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
COL22A1Q8NFW1 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms