Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RAC1P4-201ENST00000419413 579 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 VN1R20P-201ENST00000425215 966 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AP003385.1-201ENST00000426387 893 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 SUMO2P1-206ENST00000445436 284 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 MIR378C-201ENST00000578683 81 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC097376.1-201ENST00000602907 997 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AL121936.2-201ENST00000641935 662 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 SUMO2P13-201ENST00000403109 272 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 CDC42P6-201ENST00000421246 576 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AL024493.1-201ENST00000449217 833 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 COX6B1P4-201ENST00000519826 484 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 ULK4P2-202ENST00000564187 492 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC025283.1-201ENST00000572039 734 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 MIR3614-201ENST00000581261 86 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AL359742.1-201ENST00000622497 540 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 NLN-202ENST00000502464 8354 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 RN7SKP78-201ENST00000364711 318 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 ATP6V1G1P4-201ENST00000438388 335 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC008417.1-201ENST00000510014 565 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 SMIM12P1-201ENST00000603004 274 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC112243.1-201ENST00000623949 3851 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 OR7E25P-202ENST00000641088 5937 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AC023245.2-201ENST00000530760 2978 ntBASIC2.08□□□□□ -2.08
SYNE1Q8NF91 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SYNE1Q8NF91 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL391419.1-201ENST00000398901 1275 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 IFIT1P1-201ENST00000400497 1449 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL590128.1-201ENST00000433407 286 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 HMGN1P16-201ENST00000508308 283 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC093816.1-201ENST00000515076 913 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SNORA74.1-201ENST00000516320 180 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC006512.2-201ENST00000543250 486 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 EEF1A1P17-201ENST00000547505 1275 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RPS4XP21-201ENST00000603814 750 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC073593.1-201ENST00000624500 411 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC018659.2-201ENST00000624690 715 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 TPTE2P2-201ENST00000403471 1466 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RN7SKP229-201ENST00000410465 302 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms